Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo18g01070 | ATGAGTGAGTTGAGAGAGCTATCGTCTTTAGGTCTGGTTTTCAAAAGCAATTCCGTGTACTCCACAGCAGAGCCGCAGTTTCTTTGTCCGCGATTTGCACAGCCTACCAACCTCTGCACTCGCAGCCGCGTCAAGATCGTTGAGCTGCAGGCTGCCTTCTCCGTCTCCATGGCCGCAGCATTGCCCTCACTTGCCCCATTACTCATTTTTGCCAGAATTTTGGGACTGCTTGTTGCCGTTCTGATCTTCGTTTGGGCTCTTGCCTTCAGTTCTAGCTTCGGCCATCTTCCCCCCGCCCCAGATGACCGTATCTTCGATGTTCTGCATCCTTTGTTCATGGTAATTGGTTTCATTCTACTCAGCGGAGAAGCCATTTTGGTTCATAGTTGGCTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATCTGATTCTTCAAGGGCTGGCTTTGACTTCTGGGTTTTTTGGAATTTGGACCAAGTTTCATTGGGATCGTGGCTTTCTGGCTAACTTCCACAGCGTACATTCTTGGTTGGGTTTGAGCGTTTTCACTTTGTTTGGAGCTCAGTGGATGATGGGTTTTCTGAGCTTCTGGCACTGGAGGGAGGTGAGAGCAACAAGAGAAAGAGTGCTGCCATGGCATGTATTCCTTGGGCTATACAGTTATGCATTGGCAGTGACAGTAGCAGAAACAGGGCTTCTAGAGAAGCTGACATTGTTGCAAACAAAGAGACATGTCCCTAGAAAAGGCCCTGAAGCCATGGTTGTCAACAGTCTAGGCCTGGCCTTGGCTTTGCTCGGTGGAACTGTGGTGCTCACTGCTATATCTCCTAAATATACTCCTTCACTTCCCACCATCAAACAGCCATTTGTCTCCAATTCAAAGCCTTTGTCTTCTTAA | 900 | 48.33 | MSELRELSSLGLVFKSNSVYSTAEPQFLCPRFAQPTNLCTRSRVKIVELQAAFSVSMAAALPSLAPLLIFARILGLLVAVLIFVWALAFSSSFGHLPPAPDDRIFDVLHPLFMVIGFILLSGEAILVHSWLPGSRNLRKSVHLILQGLALTSGFFGIWTKFHWDRGFLANFHSVHSWLGLSVFTLFGAQWMMGFLSFWHWREVRATRERVLPWHVFLGLYSYALAVTVAETGLLEKLTLLQTKRHVPRKGPEAMVVNSLGLALALLGGTVVLTAISPKYTPSLPTIKQPFVSNSKPLSS | 299 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 11311575 | 11314637 | - | CmoCh18G010700.1 | Cmo18g01070 | 402843 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo18g01070 | 299 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED | 58 | 283 | - | - | |
| Cmo18g01070 | 299 | SMART | 561_7 | 108 | 233 | IPR006593 | - | |
| Cmo18g01070 | 299 | Pfam | Eukaryotic cytochrome b561 | 108 | 238 | IPR006593 | - | |
| Cmo18g01070 | 299 | Gene3D | - | 58 | 282 | - | - | |
| Cmo18g01070 | 299 | ProSiteProfiles | Cytochrome b561 domain profile. | 70 | 275 | IPR006593 | - | |
| Cmo18g01070 | 299 | PANTHER | CYTOCHROME B561-RELATED | 58 | 283 | IPR043205 | GO:0016491 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo18g01070 | Cmo-Chr18:11311575 | Cmo19g00423 | Cmo-Chr19:5077696 | 4.70E-36 | dispersed | |
| Cmo15g00206 | Cmo-Chr15:986101 | Cmo18g01070 | Cmo-Chr18:11311575 | 1.52E-46 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo18g01070 | K08360 | - | csv:101205948 | 408.297 |