Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01093 ATGGGGCTTTGTGGTTTCTTGTCTGTGAGCCACAGCTTGACGTTGGATTACTATGCCAAAACTTGTCCCACTGTGTTGCAGGTTGTGAGGAAAGAGATGGAGTGTGCAGTGCTTTCTGACCCACGCAATGCAGCTTTTGTTGTCCGCTTGCACTTCCATGACTGCTTTGTTCAGGGGTGTGACGGGTCGGTTCTGCTGGACGACACGATAACGTTGCAGGGAGAGAAAAAGGCTTCCACCAACATTCACTCCCTGAAAGGCTTTAGAATCATTGACAGGATAAAGAATAGCCTTGAATCTGAATGTCCAGGGATTGTTTCTTGTGCAGACATACTCACTATTGCAGCCAGGGATGCAGTGATTCTGGTGGGCGGTCCTTACTGGGAGGTTCCTCTTGGAAGAATGGATTCCACAACTGCGGGTTATGAACTAGCAGATGCAAATCTTCCCTCTGCCAATGAGGGGCTGCTGAGTATCATCTCCAAGTTTCTTTATCAGGGTCTCTCTGTCACTGACATGGTAGCTCTATCAGGAGCACACACGATCGGGATGGCGAGGTGCGAGAATTTCAGAGAAAGGATTTACGGGGATTTTGAAGCAACTTCCAACAACGGTAACAACCCGATCTCGAAGTCGTATCTCGACAAGTTGAGATCTATCTGCCCCCGAGTTGGGAAAGCTGCAGAGAACAACATAACAGCAATGGACAATGTGACACCAGAGGTGTTTGACAACTCCTATTTCCACATGCTGATGAGAGGAGAAGGGCTTATGAACTCAGACCAGGAACTGTATTCAAGCCTTCTTGGCATGGAAACAAGAGCACTGGTGAAGAAATATGCTGCTGAACCACTTGCTTTCTTTCAGCAATTCTCTGATTCCATGGTGAAGTTGGGGAATATCACTAACTCTGATAGCTATTTCACTGGGGAAGTTAGAACAAACTGCAGGTTTATCAACACTTGA 966 47.0 MGLCGFLSVSHSLTLDYYAKTCPTVLQVVRKEMECAVLSDPRNAAFVVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASTNIHSLKGFRIIDRIKNSLESECPGIVSCADILTIAARDAVILVGGPYWEVPLGRMDSTTAGYELADANLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRERIYGDFEATSNNGNNPISKSYLDKLRSICPRVGKAAENNITAMDNVTPEVFDNSYFHMLMRGEGLMNSDQELYSSLLGMETRALVKKYAAEPLAFFQQFSDSMVKLGNITNSDSYFTGEVRTNCRFINT 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11430040 11433398 - CmoCh18G010930.1 Cmo18g01093 402866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01093 321 Gene3D - 16 320 - -
Cmo18g01093 321 PRINTS Plant peroxidase signature 22 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Plant peroxidase signature 86 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Plant peroxidase signature 171 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Plant peroxidase signature 124 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Plant peroxidase signature 105 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Plant peroxidase signature 46 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 Pfam Peroxidase 29 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 ProSiteProfiles Plant heme peroxidase family profile. 12 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 172 182 IPR019793 -
Cmo18g01093 321 CDD secretory_peroxidase 13 319 IPR033905 GO:0004601|GO:0042744
Cmo18g01093 321 Gene3D Peroxidase, domain 2 150 298 - -
Cmo18g01093 321 SUPERFAMILY Heme-dependent peroxidases 13 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PANTHER PEROXIDASE 11 9 319 - -
Cmo18g01093 321 ProSitePatterns Peroxidases active site signature. 44 55 IPR019794 GO:0004601
Cmo18g01093 321 PANTHER PEROXIDASE 72-RELATED 9 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Haem peroxidase superfamily signature 172 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Haem peroxidase superfamily signature 124 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Haem peroxidase superfamily signature 44 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01093 321 PRINTS Haem peroxidase superfamily signature 106 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g01093 Cmo-Chr18:11430040 Cmo03g00743 Cmo-Chr3:6291134 8.26E-88 dispersed
Cmo18g01093 Cmo-Chr18:11430040 Cmo04g01634 Cmo-Chr4:8353182 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01093 K00430 - csv:101216779 554.673