Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g01113 | ATGACTCAGTTTTCTTCTGGGTCTTCTTTGTTTCCCATGGCAGAGATGAACATGAGCTTTTCAAACGATATGGGCGATGAATATCAGAAGTTCATCAAGCGAATGAACCCACCCAGAGTCGTAATCGATAACAAATCCTGCAAGAACGCCACGGTTGTTCGGGTGGATAGTGCTAATAAACATGGCATACTTCTTGAAGTTGTTCAAGTCTTGACTGATCTTAATCTTATCATAACTAAAGCTTACATTTCTTCTGATGGGAACTGGTTCATGGATGTTTTTAATGTCACGGATCAAAATGGGAACAAGGTTATGGATGAAGGGATTTTAGATTACATACGATCATCGCTCGGTCCCGATTCGTGTTGTTCATCTTCCATGAGATCTGTAGGTGTCGAATCTTCTACAGATCATACTGTAATTGAGCTCGTTGGCTGTGATCGACCTGGACTTCTTTCTGAAGTAACTGCTGTTCTTACTCATCTTAAATGTAGTGTAGAAAGGGCTGAGGTGTGGACACATAACACTCGAGTTGCTGCAGTGATGCACGTGAGGGACGAGGAAGCGTCGGTCACTGGTTCGGCAGTGACAGACTTGGAGAGATTGTCCACAATCAAGAAATTGCTTTGCAATGTGCTTAAAGGCAGCAACAAGTGTAGGGGAGCTAAGACTGTGTTCTCTCATGAGGCTATCCATACTGAGAGAAGACTTCACCAGATGATGTTTGCGGATCGAGATTACGAGCGAGCGGATGACGAAACGTTCAATGGAAAGCAGAAGCCAAATGTGAATGTTGTCAATTTGTTTGACAAAGATTATTCAGTGGTCACCATTCAATGCAAAGATAGACCAAAACTTCTGTTTGATACAGTTTGTACATTGACTGACATGCAATATGTTGTTTTCCATGCCAATGTTGATGCTGAAGGGCCAGAGGCTTATCAGGAATATTATATTAGGCACATAGATGGATCTCCTGTGAATTCAGAAGCTGAGAGACAAAGGTTGATACAATGTCTTGGAGCTGCCATTGAAAGACGAGTATCCGAGGGATTGAAGCTTGAGCTATGCACTACTGATAGAGTTGGGCTACTCTCTGATGTCACACGCATCTTCAGAGAGAATAGCTTGAGTGTGAGTCGAGCCGAAGTGAGAACGGAAGGAGGCAATGCAATCAATACATTTTACGTGCGCGATGCGTCGGGTTATCCCATCGATTCAAAGACGATAGATTCGATAAGGCAAGTGATTGGTCAATCCATATTGAAGGTGAAAGGCAGCCCTGATGAAGGGAAATCTGATTCACAAGACTCTCCAAGTAGGTTCCTGTTTGGTGGTCTGTTTAAGTCAAGATCTTTAGTGAATTTTGGATTGGTTAGATCATATTCTTGA | 1392 | 42.74 | MTQFSSGSSLFPMAEMNMSFSNDMGDEYQKFIKRMNPPRVVIDNKSCKNATVVRVDSANKHGILLEVVQVLTDLNLIITKAYISSDGNWFMDVFNVTDQNGNKVMDEGILDYIRSSLGPDSCCSSSMRSVGVESSTDHTVIELVGCDRPGLLSEVTAVLTHLKCSVERAEVWTHNTRVAAVMHVRDEEASVTGSAVTDLERLSTIKKLLCNVLKGSNKCRGAKTVFSHEAIHTERRLHQMMFADRDYERADDETFNGKQKPNVNVVNLFDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVNSEAERQRLIQCLGAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVSRAEVRTEGGNAINTFYVRDASGYPIDSKTIDSIRQVIGQSILKVKGSPDEGKSDSQDSPSRFLFGGLFKSRSLVNFGLVRSYS | 463 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 11530764 | 11533621 | + | CmoCh18G011130.1 | Cmo18g01113 | 402886 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g01113 | 463 | CDD | ACT_ACR_1 | 50 | 119 | - | - | |
Cmo18g01113 | 463 | SUPERFAMILY | ACT-like | 47 | 115 | IPR045865 | - | |
Cmo18g01113 | 463 | SUPERFAMILY | ACT-like | 135 | 204 | IPR045865 | - | |
Cmo18g01113 | 463 | ProSiteProfiles | ACT domain profile. | 140 | 227 | IPR002912 | - | |
Cmo18g01113 | 463 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 | 19 | 461 | - | - | |
Cmo18g01113 | 463 | CDD | ACT_ACR_3 | 273 | 347 | - | - | |
Cmo18g01113 | 463 | Gene3D | - | 134 | 213 | - | - | |
Cmo18g01113 | 463 | ProSiteProfiles | ACT domain profile. | 353 | 429 | IPR002912 | - | |
Cmo18g01113 | 463 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 19 | 461 | IPR040217 | - | |
Cmo18g01113 | 463 | SUPERFAMILY | ACT-like | 349 | 416 | IPR045865 | - | |
Cmo18g01113 | 463 | Pfam | ACT domain | 147 | 192 | IPR002912 | - | |
Cmo18g01113 | 463 | Pfam | ACT domain | 51 | 102 | IPR002912 | - | |
Cmo18g01113 | 463 | ProSiteProfiles | ACT domain profile. | 52 | 132 | IPR002912 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g01798 | Cmo18g01113 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01552 | Cmo-Chr2:8992076 | Cmo18g01113 | Cmo-Chr18:11530764 | 9.93E-159 | dispersed | |
Cmo06g00768 | Cmo-Chr6:3991126 | Cmo18g01113 | Cmo-Chr18:11530764 | 1.30E-152 | dispersed | |
Cmo07g00643 | Cmo-Chr7:2905089 | Cmo18g01113 | Cmo-Chr18:11530764 | 7.24E-126 | dispersed | |
Cmo12g00090 | Cmo-Chr12:493248 | Cmo18g01113 | Cmo-Chr18:11530764 | 0 | dispersed | |
Cmo14g01488 | Cmo-Chr14:11978264 | Cmo18g01113 | Cmo-Chr18:11530764 | 2.55E-168 | dispersed | |
Cmo15g00070 | Cmo-Chr15:380213 | Cmo18g01113 | Cmo-Chr18:11530764 | 7.92E-144 | dispersed | |
Cmo15g01235 | Cmo-Chr15:8504492 | Cmo18g01113 | Cmo-Chr18:11530764 | 3.67E-152 | dispersed | |
Cmo16g01078 | Cmo-Chr16:7623330 | Cmo18g01113 | Cmo-Chr18:11530764 | 5.37E-154 | dispersed | |
Cmo17g01371 | Cmo-Chr17:10648913 | Cmo18g01113 | Cmo-Chr18:11530764 | 3.25E-171 | dispersed | |
Cmo18g01113 | Cmo-Chr18:11530764 | Cmo04g03102 | Cmo-Chr4:21572218 | 4.70E-172 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g01113 | - | - | jcu:105630587 | 740.339 |