Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo18g01118 | ATGGGGAAAACCGGTGGAAAGCTGCCGAGTTTTTGCCTGAACCGGATCCGGTCTCATGTTCGTGTGCCAATTCAGTCCAAACCGGACTCTGTTTCTGTGAAAACAGGGGAGAGGAAGGGCGGGGAGTTTGATGAGAGTAATGGTGGAGGTAAGCCGGCGTTGGGAATTGGAAGGAAGATAATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCAATGGGCGCTCTCAAATACGGTTCAGAATCAAGATATGATTGTTCTTCTCCATCTCACCAACCCTTCAAAAAAAGGGGAAGGATCTAAGGAGACAGCACCAAGAACGTATGAACTAGTTCATTCGATGAGAAATCTATGTCAATTGAAGCGACCCGAGGTGGAAATTGAAGTAGCAGTGGTGGAAGGGAAGGAGAAAGGGCCAGTGATTGTAGAAGAAGCAAGAAAGCAAGGGGCATCGTTGCTGGTTTTGGGGCAGAAGAAGAAACGGTCGACGACATGGCGGCTTCTGATGATCTGGGCCGGCCACCGGTGGGGTGGCGGCGGAGACGGCGGCGGAACAGTGGAGTATTGTATTCAGAATGCGAGCTGCATGGCGATTGCAGTCAAAACAAACAACATCTACTCGTCATGGGCACGACCCATAACAAGTAAGTCAAAACGGACAACAAAATTAAACACATCCATAATTATTTAA | 699 | 48.35 | MGKTGGKLPSFCLNRIRSHVRVPIQSKPDSVSVKTGERKGGEFDESNGGGKPALGIGRKIMIVVDSTIEAEGALQWALSNTVQNQDMIVLLHLTNPSKKGEGSKETAPRTYELVHSMRNLCQLKRPEVEIEVAVVEGKEKGPVIVEEARKQGASLLVLGQKKKRSTTWRLLMIWAGHRWGGGGDGGGTVEYCIQNASCMAIAVKTNNIYSSWARPITSKSKRTTKLNTSIII | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 11556233 | 11558457 | - | CmoCh18G011180.1 | Cmo18g01118 | 402891 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo18g01118 | 232 | Pfam | Universal stress protein family | 58 | 204 | IPR006016 | - | |
| Cmo18g01118 | 232 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 204 | - | - | |
| Cmo18g01118 | 232 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 58 | 206 | - | - | |
| Cmo18g01118 | 232 | MobiDBLite | consensus disorder prediction | 25 | 50 | - | - | |
| Cmo18g01118 | 232 | CDD | USP_Like | 59 | 203 | - | - | |
| Cmo18g01118 | 232 | Gene3D | HUPs | 57 | 209 | IPR014729 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo04g01798 | Cmo18g01118 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo13g01084 | Cmo-Chr13:8971326 | Cmo18g01118 | Cmo-Chr18:11556233 | 3.74E-08 | dispersed | |
| Cmo14g01894 | Cmo-Chr14:14146801 | Cmo18g01118 | Cmo-Chr18:11556233 | 7.47E-10 | dispersed | |
| Cmo11g00227 | Cmo-Chr11:1122330 | Cmo18g01118 | Cmo-Chr18:11556233 | 8.74E-38 | wgd | |
| Cmo13g01102 | Cmo-Chr13:9047873 | Cmo18g01118 | Cmo-Chr18:11556233 | 6.12E-39 | wgd | |
| Cmo18g01118 | Cmo-Chr18:11556233 | Cmo04g01798 | Cmo-Chr4:9043364 | 1.57E-98 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo18g01118 | - | - | cmax:111467624 | 374.4 |