Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01121 ATGGCTGTATGTGGGGATGATAAAGATAGAGTGCTGAGGATCCATGAAAGTTTGGAGGAACTTAGTACTGATTTAGCTGATTATATTGCTGAATTATCAGAGGCATCGGTGAAAGAACGTGGGGTGTTTTCTATTGCGTTATCTGGTGGTTCTGTCATTAACTTGATGGGAAAGCTCTGTGAAGCTCCTTACAATAAGACTGTCGACTGGGCCAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCCGACAGCAATTATAAGCTTGCAAAGGACAACCTTCTTTCCAAGGTGCCAATTATTCCCAGCCATGTACACTCGATCAATGATTCTGTGTCGGCGGAGGAAGCTGCTGATGAGTACAAGTTCGTCATTCGACAGTTAGTTAAATCCCGCATCGTAAGCGTGTCTGATGTAAGTGACAGTCCTAAGTTTGACCTCATTCTTCTTGGAATGGGTTCTGATGGCCATGTTGCCTCATTATTCCCTGGTCACTCAGTGCTCGAAGAGAAAGATGAATGGGTTACCTTCATTACCAATTCTCCAAAACCTCCTCCAGAGAGGATCACCTTCACATTGCCTGTGATCAACTCTGCATCCAATGTAGCCATTGTTGTGACAGGTGAAAACAAAGCAGAGACCGTACATTTGGCCATTGACGACGTAGGACCCGACTGCCCACTCCTACCTGCGAGGCTAGTACAGCCAAAGAAAGGAAAGTTGGCATGGTTTTTGGATAAATATGCCGCTTGGAAACTTGACAATTACCAATTGCATGAGCAGGCTTAA 804 44.65 MAVCGDDKDRVLRIHESLEELSTDLADYIAELSEASVKERGVFSIALSGGSVINLMGKLCEAPYNKTVDWAKWYIFWADERVVAKSHADSNYKLAKDNLLSKVPIIPSHVHSINDSVSAEEAADEYKFVIRQLVKSRIVSVSDVSDSPKFDLILLGMGSDGHVASLFPGHSVLEEKDEWVTFITNSPKPPPERITFTLPVINSASNVAIVVTGENKAETVHLAIDDVGPDCPLLPARLVQPKKGKLAWFLDKYAAWKLDNYQLHEQA 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11575300 11579438 - CmoCh18G011210.1 Cmo18g01121 402894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01121 267 Gene3D - 8 260 - -
Cmo18g01121 267 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 261 IPR037171 -
Cmo18g01121 267 TIGRFAM pgl: 6-phosphogluconolactonase 14 257 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cmo18g01121 267 Coils Coil 18 38 - -
Cmo18g01121 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 263 IPR039104 -
Cmo18g01121 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 263 - -
Cmo18g01121 267 CDD 6PGL 19 250 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cmo18g01121 267 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 18 248 IPR006148 GO:0005975
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01793 Cmo18g01121 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01069 Cmo-Chr15:6953906 Cmo18g01121 Cmo-Chr18:11575300 5.28E-89 dispersed
Cmo16g00030 Cmo-Chr16:140808 Cmo18g01121 Cmo-Chr18:11575300 5.82E-67 dispersed
Cmo18g01121 Cmo-Chr18:11575300 Cmo04g01793 Cmo-Chr4:9019060 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01121 K01057 - csv:101210739 479.944