Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01125 ATGGCAGCGACGGGTAGAAGTGAAAGAAGTTCGCGTTCAACAGCAGAACAACAGCGACGGGTAGATTTTAGTGGTAGTGTTCGTCCTGAAGGTACTTCCAGGGAAGGGTTCTCATCGCCTTTAAATTTGTTGGAATTGCCAAGTATCGTTCAAATTGACGCAAATGTTAAACGATCTGAAGCAGGCACGATTTGTTTGGGAAATCCCGATCGTGGTCTCTACCCGGTTGAATTTAAGGATGATGAGAGCGATGTTTCCAGCGTATATTCTTCCAAATCAGAGGAGAGTTGCGGTTCTCAAGGTCCCGCTTCTCCATCCCAAGTTTTTGATTTTACCCCTAAGTCCGGTGGAGATGTTCTGTCTCCAACTCAATCCCCTCCTCTTCAGACGATGGATCGTGTGGGAGGAAATGAACCATATGATCCATTTAGAATCCCATCTGCAGTTTTCCAAACAAGTAGATCAATCAGCCAATTGGAATGGAGTATTGGTTCAAATGAGTCCTTGTTTAGCATTAATGTCGGAAACAATAGTTTCTCTAGAGATCATATGTTGATGTTGAGTGATTCGCAGAAGTCTAGCGAGTTAACAAAATCCGGCGAGTTGTTTGTGTTTAAACCACCACCTGTAGTTACCACATCGAGAGAAACTGAAGTGGCGAGTGTTGAACTCGAAGAGGAGTCTACAATGGCAGATACCACAGAATATGACATTAAGGACAAAGGGTCTTCGGTTGCCGAAGATCTTAGTGTAAGAAGCGAGCCTACTCCTGCGGTATCATGGAATTCCTCTAGCAAATCTTGCCGCTCCGGTGGAAGCCAAAGCAGCTCAAATTCCTTCGCTTTCCCCATATCACAATTATCTGGCAACTTCGTTACTATGGTCAAAAGAAATTTGGCCGATGAGGAGGTGCAGGTTTCTGTTCATGTTCTTGTCGCAAATGGAGTTTCTGTTCATGTTCTTGTCGCAAATGGAGTTGCTGTTCATCTTCTTGTTGCAAATGGGGTTGCTCTTCATCTTCTTGTTGCAAATGGGGTTGCTCTTCATCTTCTTGTTGCAAATGGGGCTTCTCTTCATCTTCTTGTTGCAAATGGGGTTGCTCTTCATCTTCTTGTTGCAAATGGGGTTGCTCTTCATCTTCTTGTTGCAAATGGGGCTGCTCTTCATGCTCCTGTTGCAAATGGGGTTGCCCTTCATGTTCATGTCGCAAATGGGATTGCTGTTCATGTTCTTCTTGTTGCAAACGGGATTGCTGTTCATGTTCTTCTTGTTGCCAATGGAGTTTTTGGTCACGTTCTTGCAGCGGATGGAACTGTTGTTCATGTTCTAGTTTCTCATGCAGCTGCTTTAGTTGTCGTTTTCGTCGTTGTTGTCATTTTCGTCGATGTTGTCATTTTCGTCGATGTTGTCATTTTCATGGTTGCTGTCATTATTATCCTTCTTATCATATTTGTCGTTGTTGTTGAAAAGACACTGTCGTTGAATCTTCCCTTGACATAG 1500 43.67 MAATGRSERSSRSTAEQQRRVDFSGSVRPEGTSREGFSSPLNLLELPSIVQIDANVKRSEAGTICLGNPDRGLYPVEFKDDESDVSSVYSSKSEESCGSQGPASPSQVFDFTPKSGGDVLSPTQSPPLQTMDRVGGNEPYDPFRIPSAVFQTSRSISQLEWSIGSNESLFSINVGNNSFSRDHMLMLSDSQKSSELTKSGELFVFKPPPVVTTSRETEVASVELEEESTMADTTEYDIKDKGSSVAEDLSVRSEPTPAVSWNSSSKSCRSGGSQSSSNSFAFPISQLSGNFVTMVKRNLADEEVQVSVHVLVANGVSVHVLVANGVAVHLLVANGVALHLLVANGVALHLLVANGASLHLLVANGVALHLLVANGVALHLLVANGAALHAPVANGVALHVHVANGIAVHVLLVANGIAVHVLLVANGVFGHVLAADGTVVHVLVSHAAALVVVFVVVVIFVDVVIFVDVVIFMVAVIIILLIIFVVVVEKTLSLNLPLT 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11605507 11607668 - CmoCh18G011250.1 Cmo18g01125 402898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01125 499 MobiDBLite consensus disorder prediction 1 40 - -
Cmo18g01125 499 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 77 285 - -
Cmo18g01125 499 MobiDBLite consensus disorder prediction 1 21 - -
Cmo18g01125 499 MobiDBLite consensus disorder prediction 89 129 - -
Cmo18g01125 499 PANTHER - 77 285 - -
Cmo18g01125 499 MobiDBLite consensus disorder prediction 242 274 - -
Cmo18g01125 499 MobiDBLite consensus disorder prediction 85 129 - -
Cmo18g01125 499 MobiDBLite consensus disorder prediction 255 274 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01788 Cmo18g01125 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00317 Cmo-Chr10:1421901 Cmo18g01125 Cmo-Chr18:11605507 1.03E-14 wgd
Cmo15g00242 Cmo-Chr15:1196815 Cmo18g01125 Cmo-Chr18:11605507 5.28E-09 wgd
Cmo18g01125 Cmo-Chr18:11605507 Cmo04g01788 Cmo-Chr4:8988809 1.54E-07 wgd
Cmo18g01125 Cmo-Chr18:11605507 Cmo04g02932 Cmo-Chr4:20770420 3.53E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01125 - - bhj:120081528 307.375