Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01131 ATGGCTTCGATGACTAGCGTAATACAGTCTCCGATTCGTGTATGTCGGTTACCTACACTGCCATTGACTCCGAATAGAACAGTTCCCGCCAGTTCTGTCGTTGTCAAGTGTCGATCACTTGATTCTAAAGCTTTGAACACGCCGCTTTCACCGTTGACGGAGAATCGAACTGTTTCTCCGTCGGTGGAGCTATGTAGCAAGGCTATCGGACTCTTAAGCTCTAGACAACCGTTGACGTCTCGTAGTGTTGTTCGTCGGCTGGTCGTGAGGGCGGCTGCAGCTGATGCCGATGGAGCTTCCGATGGGTTGACTGGCCCTTCAAAGAGCTTTGCCGCAAGATTTCCAGCACTTGTTACTGGTTTCTACTTCTTTATGTGGTACTTTTTAAATGTTATTTTCAACATACTCAATAAAAAAGTCTACAATTATTTCCCATATCCATACTTTGTCTCTGTCATACATCTTCTTGTTGGAGTTGGATATTGTCTCATTTCTTGGGCTGTAGGTCTGCCAAAACGTGCTCCGATGGATAAGGAGCTCTTGCTGTTATTGACACCAGTTTCGCTATGCCATGCACTTGGACATGTGATGTCAAATGTTTCATTTGCAGCTGTTGCTGTGTCCTTCACTCACACTATCAAAGCCTTGGAGCCATTCTTTAACGCTGCTGCTTCTCAATTTATTTTGGGACATCAAATTCCCTTCAGCTTGTGGCTCTCTCTAGCACCTGTTGTCTTAGGTGTGTCAATGGCATCACTAACGGAGCTTTCCTTCAACTGGACTGGCTTTGTTAGTGCAATGATTTCAAACATTGCATTCACTTATAGAAGTATCTATTCGAAGAAGGCAATGACAGGAATGGACAGTACGAACGTGTATGCATACACCTCAGTAATTGCTCTTTTGTTTTGCATTCCTCCTGCAGTAATGATCGAAGGACCGCAGCTACTGCAGCATGGTTTTAAGGATGCCATTGCCAAAGTGGGTCTCCAAAAGTTCCTGTCTGATCTTTTCTGGATTGGAATGTTTTATCATCTATACAATCAGCTTGCCACTAATACTCTTGAACGAGTTGCACCATTAACACATGCTGTAGGAAACGTATTGAAGCGAGTTTTTGTGATTGGGTTCTCCATTGTTGTTTTTGGCAATAAAATCTCAACTCAAACTGGAATTGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAAACTTGGAGGAGCAAAAACGGAGGGCTGCTAAAACTCCAGCATCATAG 1275 43.84 MASMTSVIQSPIRVCRLPTLPLTPNRTVPASSVVVKCRSLDSKALNTPLSPLTENRTVSPSVELCSKAIGLLSSRQPLTSRSVVRRLVVRAAAADADGASDGLTGPSKSFAARFPALVTGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVGYCLISWAVGLPKRAPMDKELLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGHQIPFSLWLSLAPVVLGVSMASLTELSFNWTGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSVIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANLEEQKRRAAKTPAS 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11626770 11631661 - CmoCh18G011310.1 Cmo18g01131 402904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01131 424 Pfam Triose-phosphate Transporter family 118 405 IPR004853 -
Cmo18g01131 424 SUPERFAMILY Multidrug resistance efflux transporter EmrE 299 406 - -
Cmo18g01131 424 PANTHER TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC-LIKE ISOFORM X1 67 413 - -
Cmo18g01131 424 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 117 415 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cmo18g01131 424 PANTHER SOLUTE CARRIER FAMILY 35 67 413 - -
Cmo18g01131 424 SUPERFAMILY Multidrug resistance efflux transporter EmrE 160 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00219 Cmo-Chr7:1098417 Cmo18g01131 Cmo-Chr18:11626770 7.56E-121 dispersed
Cmo18g01131 Cmo-Chr18:11626770 Cmo03g00550 Cmo-Chr3:5496170 1.69E-65 dispersed
Cmo18g01131 Cmo-Chr18:11626770 Cmo03g01286 Cmo-Chr3:9742436 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01131 K15283 - csv:101221040 684.485