Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01134 ATGCTTTATGCTCTGCTTCGAGATTTAAACAGAAGGCGCTTCCCATTTAGAGTGGTTCTGAACTGGATTATTGAAGGTACTTCAGAAATATTGGACATGAGAAGCTCCTGGGTTAATAAAATATCTGTAATCTTGGGCTCCAAACCACCATTCAACTGGTTAATCTTGTGTCTCATCAGCGTGCTTGCATTAATTGTAGTTCTAGGAACGTCTACTTCAAATGTCTTTGATTCAGTTTCTACCACGCCAGTGTCTGACATTTATACTAGTTATAGAAGGCAAAAAGAAAGGGCCGCAATTGATTTGTTTGACTTAAAGTCTCTTTCATTAGCCACGGGTCGACTCAAAGAGTTTGGTCTTTGTGGAAAAGAAAGAGAAAACCATGTGCCATGTTACAATGTTACAGCAAATACGTTAGCTGGATACAAAGAAGGGGAGGAGTATGATAGGCACTGTGAAGTGTCTAGAACAGCAGAGCGTTGCCTGGTTCGTCCTCCTAAAGACTACAAGATCCCTCTGAGTTGGCCTGTTGGTAGGGATATAATATGGAGTGGGAATTTGAAGGTAACAAAAGATCAACTTCTGTCTTCTGGGAGCCCTACCAAAAGGTTGATGTTATTAGAAGAGAACCAAATTTCTTTTCACTCGGAGGATGGTGATGGAGTCAAAGAGTATTCCTTTCAAATCGCAGAGATGATTGGTTTAGGCACTGACTCTGAATTTCTTCAAGCTGGTGTACGCTCGATACTTGATATTGGTTGTGGGTTTGGTAGCTTTGGTGCTCATTTAACATCAATGAATGTAATGGTTATGTGCATTGCGACCTATGAGGCGACTGGCAGTCAAGTTCAAATGGCTCTAGAGAGAGGCCTTCCAGCGATGCTTGGCAACTTTATTACAAAACAGCTTCCATATCCATCCTTGTCATTTGACATGGTTCACTGTGCACAATGTGAAATCTCTTGGAACGATAAAGGTGGGATATTCCTTATTGAAGCCGACCGGTTGCTAAGACCTGGAGGTTATTTTGTTTTAACCTCTCCCACAAGCAAGGCAGTCGGTGGTTCATTGTCTTCCAAGAAGATAAGCATTTTGACACCACTGGAAGAGATTACCCGAAGATTATGTTGGACTTTTTTAGCTCAGCAGTATGAAACTTATATTTGGCAGAAAACTACAGATCCTCGTTGCTATTTATCTGGCAAGCAGGAAATTGTACCACTTTGTAAAGAAGGGCATGATACTCCATCATATTATCAACCTCTGGTACCATGCCTAAGTAGTACTACCAGCAAGCGGTGGATTCCAATCCAGAACAGGTCTTCCAGTTCTCGCGTTCAATCAGATGACTACGCTGATGACTTACAAATTTGGCGAACGGCTTTGAAAAACTATTGGTCCTTACTTACGCCTTTAATTTTCTCTGACCATCCAAAGAGGCCTGGTGATGAAGATCCATTACCTCCATTTAACATGATACGCAATGTGATGGACATGAATGCTCATTATGGGGGTTTAAATGCTGCGTTTGTGGAGCAAAAGAAAACGGTTTGGGTCATGAATGTTGTGCCTGTTGGATCTCCTAATACGCTTCCCCTCATACTTGATCAAGGTTTTGCTGGTGTTCTGCACGATTGGTGTGAACCTTTCCCCACTTATCCACGAACATATGATTTGCTCCATGCAAATGGGCTCCTCTCACAGCTACTTTCAAGTAGGTGCAGCATGCTTGAATTTTTAGTTGAGATGGACCGTATACTGCGCCCTGAGGGATGGGTTATTCTAAATGACAAAGTGGGACCGATAGAGAAGGCGCGAATGCTTGTTACACATATTCGTTGGGAGGCAAGGGTGATCGACTTTCAGAATGGCAGCGACCAAAGGCTCCTTGTTTGCCAGAAACCATTCGTGAAAAAATGA 1920 42.55 MLYALLRDLNRRRFPFRVVLNWIIEGTSEILDMRSSWVNKISVILGSKPPFNWLILCLISVLALIVVLGTSTSNVFDSVSTTPVSDIYTSYRRQKERAAIDLFDLKSLSLATGRLKEFGLCGKERENHVPCYNVTANTLAGYKEGEEYDRHCEVSRTAERCLVRPPKDYKIPLSWPVGRDIIWSGNLKVTKDQLLSSGSPTKRLMLLEENQISFHSEDGDGVKEYSFQIAEMIGLGTDSEFLQAGVRSILDIGCGFGSFGAHLTSMNVMVMCIATYEATGSQVQMALERGLPAMLGNFITKQLPYPSLSFDMVHCAQCEISWNDKGGIFLIEADRLLRPGGYFVLTSPTSKAVGGSLSSKKISILTPLEEITRRLCWTFLAQQYETYIWQKTTDPRCYLSGKQEIVPLCKEGHDTPSYYQPLVPCLSSTTSKRWIPIQNRSSSSRVQSDDYADDLQIWRTALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMNAHYGGLNAAFVEQKKTVWVMNVVPVGSPNTLPLILDQGFAGVLHDWCEPFPTYPRTYDLLHANGLLSQLLSSRCSMLEFLVEMDRILRPEGWVILNDKVGPIEKARMLVTHIRWEARVIDFQNGSDQRLLVCQKPFVKK 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11638090 11642472 - CmoCh18G011340.1 Cmo18g01134 402907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01134 639 Gene3D Vaccinia Virus protein VP39 228 392 IPR029063 -
Cmo18g01134 639 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 167 351 IPR029063 -
Cmo18g01134 639 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 33 638 IPR004159 GO:0008168
Cmo18g01134 639 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 127 634 IPR004159 GO:0008168
Cmo18g01134 639 PANTHER METHYLTRANSFERASE PMT4-RELATED 33 638 - -
Cmo18g01134 639 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 490 619 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01656 Cmo-Chr1:12536612 Cmo18g01134 Cmo-Chr18:11638090 0 dispersed
Cmo05g00528 Cmo-Chr5:2546248 Cmo18g01134 Cmo-Chr18:11638090 0 dispersed
Cmo09g00551 Cmo-Chr9:2622064 Cmo18g01134 Cmo-Chr18:11638090 0 dispersed
Cmo18g01134 Cmo-Chr18:11638090 Cmo08g01055 Cmo-Chr8:6817104 6.78E-104 dispersed
Cmo18g01134 Cmo-Chr18:11638090 Cmo04g01781 Cmo-Chr4:8961609 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01134 K23870 - csv:101213009 1210.28