Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01141 ATGGGAACAAAAGTGCAGTATGAAAGTTATTTGCCAGGTTATCATTCAATGAGGGATCTGAATGAAGATTCTCATGGTTGTAGCTGGCCATTATATTATAGTGAAAAAGCGTGTCAGAGCGGCCAATATTATAACGGAATTTTGCCAAGAGCTACCTCAGATGCATATCTAGGCTGTGATAGAGATGCTGTGAAGAGGACAATGCTTGAGCATGAAGCCCTATTCAGGAGCCAGGTTCGTGAACTGCATCGGTTATATATAAAACAAAGAGAGTTAATGAATGATATTAAAAGATCGGAACACAGACACCACATGCCAATTGACATATCGTTCTCCTCTAGTCCTCTAGCATCTCAAAGTACGCCTGAGGGAACGAGGAAATGGCATCTCCCAAGCTTTCCTCTTGCAAATTCTTCCAGTGGTAGACCATCTGCACCTTGCATTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAGAAAACAATAGAAGCGGTCTCTTACCATCCCAAAACGGAACTAGTTCAAAAGACTGCGAGGTACTAGAATCCAGACCTTCAAAATTTAGGAGGAAAACATTCGATCTTCAACTTCCAGCAGACGAGTACGCTGATAGCGAAGAAGGGGAGGTATTTCATGATGAAAAAGTGCACCCCATGCTGGGTTGCCATTCAAATGGTAACAAGAAATGTGAGACTCAGAGTTGTGTGAATCCTGGTGAAAAGAGTGGCGGCCAAAGTGCTACTTTGAGATCTGACTCGAGTTTGTGGAACAAATGTGGTTTAGCTGACTTAAACGAGCCCATTCAGGTTGAAGAGGCAAATGGGTCCAATTTTTTCGATCTTCCTAGTGCTCGTGACTCCAGCAATGGGGAGACTCAAGGCCCCGTTCCGTCCTATACGAAGCAAGAAATCTTTCCGTGCTCTAGTAATGAAGGTGGACATGCAACGAATAGGAATTCGTATATTGAGAACGGAAATAGAAGGGAGGCATTCCCTAACATCTTTAAAGCAGGTCGTAGTAAAGAGAGTGAGAAACCTTTTAATCATGGTCAGATGGAAAAGTTCCATATATCTTCTAATCCAATGCAAGTTCCACTCAACAAGTTTCATGAACTTCCAGTCTTCTATCTCAATGATAAAAGCAAGCTTCATCAGGAGTTGGACTGGCCAGTTAATGATTTGCAATTTTCCAAAAGAGGTTATGAAATGTCGAATGCTGGAGATCCCGGTTATCGTCTAGCTTCTCAGACGTCTTGTACATATCCGATCGCTCCTTCTGACATGGGCAAGTCTTGGGCTCAGTCTGGTTCGTCTTGGGAAAAGCCGAATGGCAACAGCTCCCAAAAGTCGACATTATTTCATACACAGCCATCCTTGAAATCGTCTGCTGGCGTTCACAAGAGTTTTACTTCATCATCATCTCAGAATAATGGAATTTTTGGAGATAGATGGAATTTGAGTAGTGGGTCAAGATCAAACCCGGGGTCTGGTTGTGAAACTCCTTACCGGAATGGATTTTACCTCAGGCCTACCTCTGGTTCCAAAGGTACCATAAGGCATGACCATGTGACCAACTATTACAATGGCTCGGGTTGTGTGGGCACGAATTCTCCTAGAGACATTAACTTGAATGTAGTGCTCTCAAAAACCTTATCTAATGAGGCAGGTCAACAACTGAATTACAGAACCAGAGAGGCAGAACAAAAGAATGAGGACGATCATAATGTATTACCATGGTCGAGAGCTGTACCTGCTCGTAAGAATGAAACGATCGATTCAAGAAGATTCTCTATGACTGGAGAGCTTAGTTTTGTGCTCTCTCCAAAGAATCAGTTTTCAGACAGAAATGGAACTGAAAATGGCAGTAAAGTTATATGTTATCCGAACATCGAGTCGAATTCACGTTGTAGTAACATTGAGCCCAGAAGGTTGGAACATGGTGAATGCCAGAGTAACAAAAAGCTTCTTGGGTTTCCCATTTTTGAAGGGCCACACGTTTCTAAGAATGAGTCGTTTTCTCTTACATCCCCGTCGGTACCTTTTCCTAATCCATCCGAGAATGACGTGGAAGATAACCAGAAAACTCGAGTATTTGATATCAATTTGCCTTCTGATCCTTCAGTTTTCGAGTCAGATAACGTTACTACTGGATCTCTGACCGTTAGAAATGGAAATGACGCGAAAATTTCTACTGTTAGAGTTAATATTGATTTGAACTCGTGTGTCGACGATGAAGAAGCATCTATGACACCCCTACCTCTGGCTTCTTCGAGTGCCAAGAAAAAGGTTGTGATAGATATAGATTTAGAAGCCCCGGCAATGCCTGAGACTGAAGACGATATCGATGCAGATGGACAGCAATCACAATCTCCTCAGCACAAGGCTGTTGATATTCAGGACGATCTTATGGCTGTAGCAGCAGATGCAATAGTTGCCATCTCTTCTTGTGGGCCTTCCTGTCATTTGGACGATAATGTTAGCAACGTGTTGGAAGATTCTTCGAGCGATCTCCTAAATTGGTTTGCCGAGATAGTTTCCACACGGGGGGACGATGTACAGGTCACGTCTGATACTGTATTGAGAGCCAAAGATGACAAGAATAATGAGGAAACCTCTCTGAGAGGGATTGATTACTTTGAATACATGACATTGAGGCTAGCAGAGGTCGGTGAAGAAGACTACATGCCGAAGCCCCTGCTTCCGGAAAGTATGGAAATCGAAGCTCCTGGAACCAATTTGTTACAAAATCGACCCCGAAAGGGCCAGACGAGGAGAGGAAGGCAGCGGAGGGACTTCCAGAAGGACATCCTTCCAGGCCTTTCCTCTCTATCAAGACATGAGGTTACAGAAGATCTTCAAACATTTGGTGGCCTAATGCGAGCAACAGGCCACTCTTGGCATTGCGGAGTTACGAGGAGGAACTCTACTAGAAATGGTTGCGGTAGGGGAAGACGACGATCAGTGATCAGTCCCCCGCCCCCTGTGCATTCAGCATGTAATCAGCTGATACAGCAACTAAGTAACATTGAAATGGGTCTGGAGGATGGAAGCCTGACTGGTTGGGGCAAGACAACTAGACGACCCCGTCGACAGAGATGCCCAGCCGGTAATCCTCCACCCGTTCCTTTAACTTAA 3135 44.02 MGTKVQYESYLPGYHSMRDLNEDSHGCSWPLYYSEKACQSGQYYNGILPRATSDAYLGCDRDAVKRTMLEHEALFRSQVRELHRLYIKQRELMNDIKRSEHRHHMPIDISFSSSPLASQSTPEGTRKWHLPSFPLANSSSGRPSAPCIEDVKSSLSSLKENNRSGLLPSQNGTSSKDCEVLESRPSKFRRKTFDLQLPADEYADSEEGEVFHDEKVHPMLGCHSNGNKKCETQSCVNPGEKSGGQSATLRSDSSLWNKCGLADLNEPIQVEEANGSNFFDLPSARDSSNGETQGPVPSYTKQEIFPCSSNEGGHATNRNSYIENGNRREAFPNIFKAGRSKESEKPFNHGQMEKFHISSNPMQVPLNKFHELPVFYLNDKSKLHQELDWPVNDLQFSKRGYEMSNAGDPGYRLASQTSCTYPIAPSDMGKSWAQSGSSWEKPNGNSSQKSTLFHTQPSLKSSAGVHKSFTSSSSQNNGIFGDRWNLSSGSRSNPGSGCETPYRNGFYLRPTSGSKGTIRHDHVTNYYNGSGCVGTNSPRDINLNVVLSKTLSNEAGQQLNYRTREAEQKNEDDHNVLPWSRAVPARKNETIDSRRFSMTGELSFVLSPKNQFSDRNGTENGSKVICYPNIESNSRCSNIEPRRLEHGECQSNKKLLGFPIFEGPHVSKNESFSLTSPSVPFPNPSENDVEDNQKTRVFDINLPSDPSVFESDNVTTGSLTVRNGNDAKISTVRVNIDLNSCVDDEEASMTPLPLASSSAKKKVVIDIDLEAPAMPETEDDIDADGQQSQSPQHKAVDIQDDLMAVAADAIVAISSCGPSCHLDDNVSNVLEDSSSDLLNWFAEIVSTRGDDVQVTSDTVLRAKDDKNNEETSLRGIDYFEYMTLRLAEVGEEDYMPKPLLPESMEIEAPGTNLLQNRPRKGQTRRGRQRRDFQKDILPGLSSLSRHEVTEDLQTFGGLMRATGHSWHCGVTRRNSTRNGCGRGRRRSVISPPPPVHSACNQLIQQLSNIEMGLEDGSLTGWGKTTRRPRRQRCPAGNPPPVPLT 1044
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11672334 11678273 - CmoCh18G011410.1 Cmo18g01141 402914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01141 1044 MobiDBLite consensus disorder prediction 159 179 - -
Cmo18g01141 1044 MobiDBLite consensus disorder prediction 1014 1044 - -
Cmo18g01141 1044 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 1 1043 - -
Cmo18g01141 1044 MobiDBLite consensus disorder prediction 908 930 - -
Cmo18g01141 1044 MobiDBLite consensus disorder prediction 976 995 - -
Cmo18g01141 1044 MobiDBLite consensus disorder prediction 159 181 - -
Cmo18g01141 1044 PANTHER - 1 1043 - -
Cmo18g01141 1044 MobiDBLite consensus disorder prediction 432 457 - -
Cmo18g01141 1044 Pfam Plant protein of unknown function (DUF863) 142 1034 IPR008581 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01769 Cmo18g01141 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00461 Cmo-Chr5:2154718 Cmo18g01141 Cmo-Chr18:11672334 4.74E-152 dispersed
Cmo12g00073 Cmo-Chr12:391719 Cmo18g01141 Cmo-Chr18:11672334 4.45E-46 dispersed
Cmo01g00850 Cmo-Chr1:4520662 Cmo18g01141 Cmo-Chr18:11672334 6.84E-11 wgd
Cmo13g01140 Cmo-Chr13:9231923 Cmo18g01141 Cmo-Chr18:11672334 3.41E-15 wgd
Cmo18g01141 Cmo-Chr18:11672334 Cmo04g01769 Cmo-Chr4:8929176 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01141 - - bhj:120080916 1727.22