Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g01145 | ATGGGTGACGATGAAGATAAGCTGCCACCGTCGTCGGTGCCGTCGCCGTTGAAATCTAAAGCTTTTCCGTTGCGGCCCACTATTAATCTCCCGCCACGGACCTCTATGGAGTCGCTCTTAAGCGGTGGGCCGGGTTTGGGACTCGGGTTTAGCCCAGGGCCCATGACCCTTGTCTCGAGCTTCTTCTCCGATTCCGATGACTGCAAGTCTTTTTCTCAGCTCCTCGCCGGCGCTATGACGTCGCCGGTGGCTGTTCCTCCGACGGCGTCCGAGCTCAAGGACTCTGCTGGTCTGCCCGATTCTCCGGGGCTTTTCTCGCCTGATCAGGGAACTTTTGGATTGACCCATCAGCAGGCTTTGGCTCAGGTTACCATGCAGGCTGTAGAAGCCTATTCTCATAAGCAAATACAAGCACACTCAGTAGCAGGCTCTGCAGCCTCCTCAAAGCTTTTGACCGTATTTCCGAGCGAGAAGGCTAAAGATCAGCCAGTGCCACTTCAATTGCTGAACTCTGCTGTCGTGTCGAAGGAGTCGTCCGATATCTCTCAATCCGATCAGAGATCGGTATCTTCTTCGTGTAATGTCGATAGGCCTGCTGATGATGGGTACAATTGGAGGAAATATGGGCAGAAACAAGTGAAGGGCAGTGAATTTCCTCGAAGCTACTACAAGTGCACGTACCTGAATTGTCCTGTCAAGAAAAAGGTCGAACGATCTCTGGAAGGCCACGTTACTGAAATTATTTATAAGGGTGAACACAACCACGAACGACCTCAACCGAACAAGCGTGCAAAGGATGTTGGAAATTCTAATGGATATTCAAGTGTTCATGGAAACACTGACCTATATTCTCAAGTAAAGAGTGGATATTTGAATAAGTTGAATGAGCAGTCAGCTGTGTCTTCCGTTGTGAAGAAGGATCGAGAATCGAACCTCGTTACACATGGACAGTCGTTGGATGCTAGTGACAGTGAGGGAGGGGGTGAGGTAGAAACTGGACCGAATAGAAACGATGAAGACGAACCGGATGCCAAGAGACGGAACACCGAGGCTCGGATCGAGCCAGTGTCTTCTCATAGGACGCTCACGGAATCCCGAATCATTGTGCAGACTACAAGTGAAGTCGATTTGTTGGACGATGGCTACCGGTGGCGAAAGTATGGGCAGAAAACGGTTAAAGGCAACCCTTACCCCAGGAGCTATTACAAATGCACGACTCACGGATGCAATGTTCGTAAACACGTCGAGAGAGCTTCAACAGACCAGAAAGCTGTGATAACGACGTACGAGGGCAAACACAATCACGACGTTCCAGCTGGTAAAATCAGCAGCCACGGTACAGCCAACAGTAACGTTCCTCGCCTAAAATCACAAAATATAGGAAGGGATCTGTTGTTAATGTTGCCAAAAGCAGACAGGCCCTCCAGTAACTCCTCAGCTGTGGATGGTAACAAAGTAAAAAGAAGAAAGGAGAAGTGGTGGGAGGCCCCATGGATATACGATTTTGCTAAAAAAAATGGTGTAATGAAGAGGCAAAGGCTTAAAAGAAAGAAGGAACAGAATGGAATTGTTGATGGAATCGATTTTTTCTGTGGGAAAGGGGTTCGTAATCTGAAGCCCATCCTGTTCTTCGTGTTCTTCGTGTTCTTCTTCTGGGTGTCTCCAATGAGGAAGCATGGATGGCAACTTCCTTACCATCCTCTCCAGGTTGTTGCAGTTTCTGTGTTTCTAGCTCTGGGGTTTGCTTTTTATGTCTTCTTTGCTCCTTTTGTCGGGAACAAGATTTTTCAGTATGTTATGATTGGACTATATACTCCTCTTATTACATGTGTGTTTGGTCTATATATCTGGTGTGCGGTAGCTGACCCGGCAGACACTGGAGTGTTCAAATCCAAGAAGTATGTCGATGTTCCTGATGAAGGGAAGTGTTCTCAGCAAAAAAGTTCTAAACTCGGTGGCGAATCCACGCATGATCCCAATGCTGCTGCTTCTGTGGATAAAGATGCAAATTCAAAGGACAGCCCGGCATCAAAGAAGCTGTCATGTCTTTCGTTGGTGTGCTTCCCTTGTGCATATGTATGCAATTGTTCGGGTTCGAACGAGGAATCGTCCGACCAAAACATGAGTGAAGATGGCATGTTTTACTGCAGTTTGTGTGAAGTTGAGGTTTTCAAGTATAGCAAGCACTGCAGAGTTTGTGATAAGTTTATACATGGTTTGTGCACCTTGGGCTTGAGATTGCAGCTTATTGTACAATGGTCGAGTGGAATCCTTGTGCTCATCTGCTGTTTTGTCGAGAAGAAACGGTTCTCTGTGGAAATCTCCTCCAAGTTGGGTAGCAGTTTTTCTTTGGCACCTTTCATTATTGTAGTGTTTGATGTGATTCCACCAGAGACGGGGTCTGTTAGTTCGCTCGGAAAGAGGACGGTCAGCGAAGAAGCAACCAAGAAAAAGAACCCTGCTGCTGTGAGGATCAGTCCATGGACTCTGGCAAGACTAAATGGTGATGAGGTTTCAAAGGCTGCAGCAGAGGCAAGGAAGAAGTCCAAAATTCTACAGCCTGTGGTTAGATCAGCGACACCTTTTGAACGTGAACCGGATAGCGGTTTTGGCAGTAGTGGTCGCCGAATCGTTTCACGACTCGAAAATAATAGAAGGCGAGGGAATAAACGTGTGCGACTTCCATCTGATCTACCTATGCAACACTTAACAAATGTTCCAGGAAAAGCTGTTGAAAAAGGTTTCTCTGGCACATCAACTAGCCTTGGTCCTCTTCAGCTTGAAGCACGCAGTGCTTTCCAAACAAGCCGAGCAATGTCGAGCTCAACCATGGCTGCATCGTCACCGGAGAGCAGTTTGGGGTCGCCTGACATCCATCCGTTCAGAATATCCTCCTCAGGAGCTGAAGAGTCTAAGAGAGTCACTGGCGTATTAGCAGCTAATGTAGCTGCTGCTCAAAAGGGACTTCCATTGTCGAGGTCGACTAGTGATGGATATGAAGCTTCGGGCGGAGAGGACAGCGACCGAGTTCCTTCAAGGATTGTTCAAAGACCAACAAGCTGGAACAACCTCTTATCTGATCCTTCTGAATTTCCATTCGCCGCCCATTGCCGCTGCTTTTTCCGATGGGGTTCTTTCCCTTTCTGGTGGTTCTGTTGTTTTGGCGCCACCGGATTTAGGGTCTGGAAACTGGAAATGGAATTCTCTTCTTCCGTCGATTTTCCCGGAATCCATCGGGATACTCCTCCGACGGACGAGGAATGCCACGATTTGCGTTTGCTGACCGTGGCGTCAACAAAACCCTCTGAATCCGGGATCGAACCCGACAATCAATTCCATACGATGAGCGCGTTGGAGATCTTGAGGGAAACGGTTCGGATTCTCCGCTACAATTCTACTGCGTTTGTGGTTATTGCCATTTTGCTTATTTGCCCTGTTTCCGCCGTCTTTTTATCCAATGTGTTAATCGATGAGTCGACTGTCAAGATGCTGACTATCCGATTGGTATTAATAGCCAGGTCCAGTGGGCTCCCATTGATGCCCATGATCGAACATTCATGCCAGAGATTTGCCGAGTCGATTCTTTCCTCTGCAGTGTGCTTTCCTTTGTTCGTTACCTTTTCTTTGTTATCAAAAGCTGCTGTTGTTCATACGGTGGATTGTACACACGCCAAAAGAAGGTTCGAAGCAGGCCTGTTCCTCGCTTTAGTTCGTAATATATGGAATCGTCTTGTCACGACATATGTTTCTGTGTGTCTTGCGATTGTTGGGTGTCTTACAACGTTCTTGGTTCTGCTTGGTGCTGTTTGCAGTACTTTTTATGCATTGGGATTTTCGCCTGATCTTATTATATCTGTTGCTGTGATTGGGGGGCTTGTGTTCTCTGTTATATTTGCTAATGCTGTCATCATCTGCAACATTGGGATTGTTATCTGTGTATTGGAAGATGTTGCAGGGCCAGGGGCATTGCTTAGGTCGTGTGTTCTTATTAGGGGTCAAACTCAAGTGGGGCTTTTGATATTTCTGGGATCCACAATTGGGACAGTGTTTGTGGAGGGATTGTTTGAGCATAGGGTTAAGATACTGAGCTATGGAGATGGGTCTTCGAGGATTTGGGAAGGCCCTCTTTTGGTGGTTATGTATTCATTTGTTGTGCTTACTGATTCTGTGATGAATGCGGTTTTTTACTTCAGCTGCAGATCTTCAAGTATGGTGATATCAGACGATTCTGTTTCGGATGGATCAATTGGTATTCTTTCATTCGAATTGGATGATAGTTTCATAGACTGA | 4290 | 46.85 | MGDDEDKLPPSSVPSPLKSKAFPLRPTINLPPRTSMESLLSGGPGLGLGFSPGPMTLVSSFFSDSDDCKSFSQLLAGAMTSPVAVPPTASELKDSAGLPDSPGLFSPDQGTFGLTHQQALAQVTMQAVEAYSHKQIQAHSVAGSAASSKLLTVFPSEKAKDQPVPLQLLNSAVVSKESSDISQSDQRSVSSSCNVDRPADDGYNWRKYGQKQVKGSEFPRSYYKCTYLNCPVKKKVERSLEGHVTEIIYKGEHNHERPQPNKRAKDVGNSNGYSSVHGNTDLYSQVKSGYLNKLNEQSAVSSVVKKDRESNLVTHGQSLDASDSEGGGEVETGPNRNDEDEPDAKRRNTEARIEPVSSHRTLTESRIIVQTTSEVDLLDDGYRWRKYGQKTVKGNPYPRSYYKCTTHGCNVRKHVERASTDQKAVITTYEGKHNHDVPAGKISSHGTANSNVPRLKSQNIGRDLLLMLPKADRPSSNSSAVDGNKVKRRKEKWWEAPWIYDFAKKNGVMKRQRLKRKKEQNGIVDGIDFFCGKGVRNLKPILFFVFFVFFFWVSPMRKHGWQLPYHPLQVVAVSVFLALGFAFYVFFAPFVGNKIFQYVMIGLYTPLITCVFGLYIWCAVADPADTGVFKSKKYVDVPDEGKCSQQKSSKLGGESTHDPNAAASVDKDANSKDSPASKKLSCLSLVCFPCAYVCNCSGSNEESSDQNMSEDGMFYCSLCEVEVFKYSKHCRVCDKFIHGLCTLGLRLQLIVQWSSGILVLICCFVEKKRFSVEISSKLGSSFSLAPFIIVVFDVIPPETGSVSSLGKRTVSEEATKKKNPAAVRISPWTLARLNGDEVSKAAAEARKKSKILQPVVRSATPFEREPDSGFGSSGRRIVSRLENNRRRGNKRVRLPSDLPMQHLTNVPGKAVEKGFSGTSTSLGPLQLEARSAFQTSRAMSSSTMAASSPESSLGSPDIHPFRISSSGAEESKRVTGVLAANVAAAQKGLPLSRSTSDGYEASGGEDSDRVPSRIVQRPTSWNNLLSDPSEFPFAAHCRCFFRWGSFPFWWFCCFGATGFRVWKLEMEFSSSVDFPGIHRDTPPTDEECHDLRLLTVASTKPSESGIEPDNQFHTMSALEILRETVRILRYNSTAFVVIAILLICPVSAVFLSNVLIDESTVKMLTIRLVLIARSSGLPLMPMIEHSCQRFAESILSSAVCFPLFVTFSLLSKAAVVHTVDCTHAKRRFEAGLFLALVRNIWNRLVTTYVSVCLAIVGCLTTFLVLLGAVCSTFYALGFSPDLIISVAVIGGLVFSVIFANAVIICNIGIVICVLEDVAGPGALLRSCVLIRGQTQVGLLIFLGSTIGTVFVEGLFEHRVKILSYGDGSSRIWEGPLLVVMYSFVVLTDSVMNAVFYFSCRSSSMVISDDSVSDGSIGILSFELDDSFID | 1429 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 11701929 | 11716979 | + | CmoCh18G011450.1 | Cmo18g01145 | 402918 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g01145 | 1429 | SUPERFAMILY | WRKY DNA-binding domain | 198 | 258 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | SUPERFAMILY | WRKY DNA-binding domain | 370 | 438 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Cmo18g01145 | 1429 | Gene3D | WRKY domain | 363 | 439 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | Gene3D | WRKY domain | 183 | 259 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 933 | 954 | - | - | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 249 | 280 | - | - | |
Cmo18g01145 | 1429 | ProSiteProfiles | WRKY domain profile. | 373 | 438 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 302 | 358 | - | - | |
Cmo18g01145 | 1429 | Pfam | WRKY DNA -binding domain | 200 | 256 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | Pfam | WRKY DNA -binding domain | 379 | 435 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | PANTHER | WRKY TRANSCRIPTION FACTOR 58-RELATED | 20 | 460 | - | - | |
Cmo18g01145 | 1429 | SMART | WRKY_cls | 199 | 257 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | SMART | WRKY_cls | 378 | 437 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 20 | 460 | IPR044810 | GO:0003700 | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 639 | 676 | - | - | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 882 | 903 | - | - | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 264 | 280 | - | - | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 86 | 110 | - | - | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 933 | 962 | - | - | |
Cmo18g01145 | 1429 | ProSiteProfiles | WRKY domain profile. | 200 | 258 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 993 | 1012 | - | - | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 332 | 358 | - | - | |
Cmo18g01145 | 1429 | MobiDBLite | consensus disorder prediction | 249 | 263 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01766 | Cmo-Chr4:8911214 | Cmo18g01145 | Cmo-Chr18:11701929 | 0 | dispersed | |
Cmo18g00660 | Cmo-Chr18:8373183 | Cmo18g01145 | Cmo-Chr18:11701929 | 9.21E-23 | dispersed | |
Cmo18g01145 | Cmo-Chr18:11701929 | Cmo16g01037 | Cmo-Chr16:7226008 | 3.43E-73 | dispersed | |
Cmo04g01765 | Cmo-Chr4:8903567 | Cmo18g01145 | Cmo-Chr18:11701929 | 3.58E-124 | transposed | |
Cmo12g00970 | Cmo-Chr12:9059860 | Cmo18g01145 | Cmo-Chr18:11701929 | 2.70E-25 | transposed | |
Cmo10g00226 | Cmo-Chr10:983518 | Cmo18g01145 | Cmo-Chr18:11701929 | 4.58E-22 | wgd | |
Cmo13g01143 | Cmo-Chr13:9260063 | Cmo18g01145 | Cmo-Chr18:11701929 | 4.93E-21 | wgd | |
Cmo15g00258 | Cmo-Chr15:1248796 | Cmo18g01145 | Cmo-Chr18:11701929 | 9.19E-131 | wgd | |
Cmo18g01145 | Cmo-Chr18:11701929 | Cmo04g01764 | Cmo-Chr4:8901963 | 0 | wgd | |
Cmo18g01145 | Cmo-Chr18:11701929 | Cmo04g02919 | Cmo-Chr4:20697081 | 2.72E-127 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11550 | PF03106 | WRKY | 3.00E-24 | CL0274 | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g01145 | - | - | cmo:103489160 | 683.715 |