Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01221 ATGGACAGGTCTGCAATGCCGGACTCGTTTTCCGATCATTTGGAGTGGTACTCCACTGTGGTAAGCAGTGTGGTGGTTGATAATCCTGAGAGAGAAGGTCAAGGTAATGGGGGAGGTGAAGACAGGATCATTTACAGTTATCAGAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGCTGAGAGGCTCGAGGAAGAACATGGGGTGTTGGCCGTTTTTCCTGAGGTTAAGTATGAGCTTCATACGACTAGAAGCCCCAAGTTTCTTGGGCTTGAACCGGCGGACAGTAACAGCGCCTGGTCTCAGCAAATTGCAGACCATGATGTGGTTGTCGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGATGCTGGAATGTCGCCGGTGCCGGCATATTGGAAAGGGGAATGCGAGACAGGGCGAGGCTTCACGAAACAGAATTGTAATAGAAAGATCGTTGGCGCTAGAGTGTTTTACCATGGGTATGAAGCTGCAACGGGGAAATTTAACCAACAGTTGGAGTATAAATCGCCGAGGGATCAAGATGGGCATGGGACTCACACGGCAGCCACCGTCGCCGGATCTCCGGTGGCAGGGGCAAATCTTCTGGGGTATGCTTATGGAACAGCTAGAGGAATGGCGCCTGGTGCTAGAATTGCCGCCTACAAAGTCTGTTGGGTTGGTGGCTGCTTCAGCTCCGACATTTTGTCGGCTGTGGACAGAGCTGTGGCCGACGGCGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTTTCTTCTTACTACCGTGATAGCCTCTCCGTTGCAGCATTTGGGGCAATGGAGATGGGTGTTTTTGTGTCCTGCTCGGCCGGCAATGGAGGGCCGGATCCTGTCAGTCTCACAAACGTATCGCCGTGGATAACCACCGTCGGCGCTAGTACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCAATGGAAGAACAATCACCGGCGTTTCACTTTACAGAGGAAGAATCACGATTCAAGAAAACAAACAATTCCCAGTTGTGTATATGGGGAGTAATTCAAGCAACCCTGATCCGAGTTCGCTCTGTTTAGAAGGAACTTTAGATCCCCATTTCGTCGCCGGAAAAATTGTGATATGCGATCGAGGAATTAGCCCTCGGGTTCAGAAGGGAGTGGTGGTAAAAAACGCAGGTGGTATTGGGATGATTCTGTCGAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGATTGCCATTTATTGCCGGCTGTCGCCGTCGGAGAAACAGAAGGCAAGGCAATTAAGCAATATGCATTAACAAATCGAAAACCGACGGCGACTCTAGGGCTTTTAGGTACAAGATTAGGGGTAAAACCCTCGCCGGTAGTGGCGGCGTTTTCTTCCAGAGGACCAAATTTCCTCACTCTGGAGATTCTCAAGCCCGATCTGGTAGCTCCCGGCGTCAACATCCTCGCCGCTTGGACCGGAAAAACAGGGCCGTCGAGCTTGACAACAGATACAAGAAGGGTGAAATTCAACATTCTTTCCGGAACTTCAATGTCGTGCCCACACGTCAGTGGAGTAGCGGCTTTAATCAAATCGAAACATCCCGATTGGAGCCCATCAGCGATCAAATCGGCGCTGATGACCACCGCATATGTCCACGACAACACCTACAAGCCTCTGAAAGACGCCTCCGCCGCATCCCCGTCGAGTCCGTACGAACATGGCGCCGGCCACATAAATCCCAGAAAAGCCCTAGATCCTGGTTTGGTTTACGAAATTAAACCGCAAGATTACTTCGAATTCCTCTGTACACAGGATTTAACTCCTTCACAGCTCAAAGTCTTCTCCAAACATTCAAATCGATCATGCCATCGCCTTCTCCCCAACCCTGGAGATTTGAATTATCCAGCCATCTCCGCCGTGTTCCCAGAGAAAACCACCGTCACCTCCCTGACCCTTCACAGAACCGTCACCAACGTCGGCCCTGCATCCTCGAGTTACCACGCAATAGTGTCTCCGTTCACCGGCGCCGCCGTGAAAATCGAGCCGGAGAGGCTGAACTTCACAAGGAGATATCAGAAGCTTTCATACAGAATCACTTTCGTGACGAAGAAGAGACTTAGCATGCCGGAATTTGGAGGGCTAATTTGGAAGGACGGAAGTCACAGGGTGAGAAGCCCCATTATCATCACTTGGTTGTCGTCTTTTTGA 2232 50.85 MDRSAMPDSFSDHLEWYSTVVSSVVVDNPEREGQGNGGGEDRIIYSYQNVFHGVAARLSEEEAERLEEEHGVLAVFPEVKYELHTTRSPKFLGLEPADSNSAWSQQIADHDVVVGVLDTGIWPESESFNDAGMSPVPAYWKGECETGRGFTKQNCNRKIVGARVFYHGYEAATGKFNQQLEYKSPRDQDGHGTHTAATVAGSPVAGANLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTITGVSLYRGRITIQENKQFPVVYMGSNSSNPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTAANGEELVADCHLLPAVAVGETEGKAIKQYALTNRKPTATLGLLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDASAASPSSPYEHGAGHINPRKALDPGLVYEIKPQDYFEFLCTQDLTPSQLKVFSKHSNRSCHRLLPNPGDLNYPAISAVFPEKTTVTSLTLHRTVTNVGPASSSYHAIVSPFTGAAVKIEPERLNFTRRYQKLSYRITFVTKKRLSMPEFGGLIWKDGSHRVRSPIIITWLSSF 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 12122099 12124330 + CmoCh18G012210.1 Cmo18g01221 402994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01221 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 522 532 IPR023828 -
Cmo18g01221 743 ProSiteProfiles Serine proteases, subtilase domain profile. 80 592 - -
Cmo18g01221 743 CDD Peptidases_S8_3 81 558 IPR034197 -
Cmo18g01221 743 Gene3D Peptidase S8/S53 domain 111 605 IPR036852 GO:0004252|GO:0006508
Cmo18g01221 743 Pfam Subtilase family 110 565 IPR000209 GO:0006508|GO:0008236
Cmo18g01221 743 Gene3D - 609 740 - -
Cmo18g01221 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 84 IPR037045 -
Cmo18g01221 743 Pfam Fibronectin type-III domain 639 737 IPR041469 -
Cmo18g01221 743 Pfam PA domain 351 439 IPR003137 -
Cmo18g01221 743 SUPERFAMILY Subtilisin-like 83 596 IPR036852 GO:0004252|GO:0006508
Cmo18g01221 743 PRINTS Subtilisin serine protease family (S8) signature 109 128 IPR015500 -
Cmo18g01221 743 PRINTS Subtilisin serine protease family (S8) signature 187 200 IPR015500 -
Cmo18g01221 743 PRINTS Subtilisin serine protease family (S8) signature 521 537 IPR015500 -
Cmo18g01221 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 738 IPR045051 -
Cmo18g01221 743 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 1 738 - -
Cmo18g01221 743 Pfam Peptidase inhibitor I9 5 84 IPR010259 -
Cmo18g01221 743 CDD PA_subtilisin_like 324 453 - -
Cmo18g01221 743 Gene3D - 317 461 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo16g00173 Cmo18g01221 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g01221 Cmo-Chr18:12122099 Cmo02g00248 Cmo-Chr2:1173478 0 dispersed
Cmo16g00173 Cmo-Chr16:786400 Cmo18g01221 Cmo-Chr18:12122099 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01221 - - csv:101214825 1374.38