Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g01222 | ATGACGGAGGTTTACTGTAGAATGCCAAGTGATGATGATATAGATTCGCCGGCCAAATGCCGAGAGCGCCGGCGCCGTAGAATAGAAATGAGGCGATTAGCAGCAGTACCGTCGGCGAAACCCTCGCCATCGCCGTCGACCAGTCACCACCACCGGAAGGAGAATCAAACTGAGAGTTCCGGTTTTGAGAAGAAGCGTGTTCGGAAGACGGACGGCGACGACACTCCGGAGGTTTTAACGTCTTCCTCTTCGGGGGAGGACGTGAACGCTGTAGTTGCTTCATCGTCGGTACCTCAGCCGGTGTTCGGGATGATGTCGGTTTCTGGGAGGTCACGTGAGATGGAGGATGCAGTATCGGTGAGCACGTGCCATATTGGTCCAGAAAGTCGACTACCGGTGCATTTCTTCGCCGTCTATGATGGACATGGAGGCCCTCACGTGGCAACACTATGTATGGAGAAGATGCACGTGTTAGTACAGGAGGAATGGGCGCGCGTGGTGAATACGCGCGAGGAAACTGAGAGTATCGGTGGAGGAAGTAGCGCGGCGGAGGAGGAGGCGACTTGGAGAAGAGTGATGCGGCGGAGCTTTGAGAGAATGGATGAAGTGGCACTCAATACTTGTGCCTGTGGGAGCGTCGGAGGCCAGTGTGCTTGCCATCCAATGGAGGTGGCTCTCGGTGGTTCCACCGCCGTTGTCGCTGTGCTCACGCCGGAACATATAATCGTTGCCAACTGCGGTGACTCACGCGCCGTCCTCTGTCGAGGAGGAAGGGCCATTCCGCTTTCCAATGATCACAAGCCTGATAGAATTGATGAACTAGCAAGGATCGAAGCTGCAGGAGGACAGGTGATTTTCATAAATGGAGCTCGGGTTAAAGGCATCCTTGCAATGTCCCGTGCAATTGGTAATAGTTTCTGCTATTATGGATGTTGA | 936 | 54.17 | MTEVYCRMPSDDDIDSPAKCRERRRRRIEMRRLAAVPSAKPSPSPSTSHHHRKENQTESSGFEKKRVRKTDGDDTPEVLTSSSSGEDVNAVVASSSVPQPVFGMMSVSGRSREMEDAVSVSTCHIGPESRLPVHFFAVYDGHGGPHVATLCMEKMHVLVQEEWARVVNTREETESIGGGSSAAEEEATWRRVMRRSFERMDEVALNTCACGSVGGQCACHPMEVALGGSTAVVAVLTPEHIIVANCGDSRAVLCRGGRAIPLSNDHKPDRIDELARIEAAGGQVIFINGARVKGILAMSRAIGNSFCYYGC | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 12126621 | 12128650 | + | CmoCh18G012220.1 | Cmo18g01222 | 402995 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g01222 | 311 | Pfam | Protein phosphatase 2C | 102 | 306 | IPR001932 | - | |
Cmo18g01222 | 311 | CDD | PP2Cc | 101 | 303 | IPR001932 | - | |
Cmo18g01222 | 311 | PANTHER | PROTEIN PHOSPHATASE 2C 75-RELATED | 41 | 305 | - | - | |
Cmo18g01222 | 311 | SUPERFAMILY | PP2C-like | 92 | 308 | IPR036457 | - | |
Cmo18g01222 | 311 | SMART | PP2C_4 | 91 | 310 | IPR001932 | - | |
Cmo18g01222 | 311 | Gene3D | - | 89 | 308 | IPR036457 | - | |
Cmo18g01222 | 311 | ProSiteProfiles | PPM-type phosphatase domain profile. | 101 | 311 | IPR001932 | - | |
Cmo18g01222 | 311 | PANTHER | ALPHABET, ISOFORM E-RELATED | 41 | 305 | - | - | |
Cmo18g01222 | 311 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cmo18g01222 | 311 | MobiDBLite | consensus disorder prediction | 47 | 75 | - | - | |
Cmo18g01222 | 311 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
Cmo18g01222 | 311 | ProSitePatterns | PPM-type phosphatase domain signature. | 135 | 143 | IPR000222 | GO:0043169 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo16g00172 | Cmo18g01222 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo18g01222 | Cmo-Chr18:12126621 | Cmo01g00655 | Cmo-Chr1:3349903 | 6.97E-56 | dispersed | |
Cmo16g00172 | Cmo-Chr16:778718 | Cmo18g01222 | Cmo-Chr18:12126621 | 1.59E-137 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g01222 | K14497 | - | csv:101206634 | 461.07 |