Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01236 ATGTTTCAGACAATGGCTAAAAATGCGACAGTCTTGTTTCTAATGATGATTGTTTGTGTGTCGGAAGCAGTTCTTGATACCAATTATTACTCTAAAACATGTCCCAATGCCGAGAAAATCATCCTCCAAACCGTCTACAATGCTTCCATTCACGACCCGAGAGTCCCTGCTCGTCTTCTCAGGCTCTTCTTCCACGACTGTTTCATAAGGGGATGCGATGCATCAGTGCTGATAGATTCAACGCCAGGGAATCAGGCAGAGAAAGATGCGCCTCCAAACATCTCGCTAAGGTCGTTTTATGTGATCGACGAGGCCAAATCCAAGCTTGAAACTGCTTGCCCACATTCTGTTTCTTGTGCTGATATTGTCGCCATTGCTGCTAGAGATATCGTTACTCTGTCTGGGGGGCCATATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCCAATGCTTCTGAAACCATCAACTTACCAGCTCCAACTTTCAATGTATCTCAACTAATCCAGAGCTTTGCAAACAGAGGATTGCAAGTTAAAGACTTGGTTGCTCTATCCGGGGCTCATACGCTTGGGTTCTCCCACTGTTCTTCCTTTCAATCTAGACTTCGCAACTTCAGCTCGATTCATGATACTGATCCAACTTTGGAATCTGGGTTTGCTCAAATTCTGAAAAACAAATGTCCAAAACCAAATTTGGACAAAAATGCAGGACAGTTCTTGGACCCAACTTCCTCAACTTTTGACAATGTGTATTACAAGAGACTGTTGGAAGGGAAGGGTGTGTTTGGTTCGGATCAATCTCTGTTTGGTGATTCAAGGACTAAAACGATTGTTGAATCGTTTGCTAATGATCAGAACTTGTTCTTTAAGGAATTTGCAGCTTCAATGGTGAAATTGGGTAATGTTGGGGTTATTGAAAATGGCAATGTCAGATTCAATTGCAGGGTGGTGAACTGA 963 42.78 MFQTMAKNATVLFLMMIVCVSEAVLDTNYYSKTCPNAEKIILQTVYNASIHDPRVPARLLRLFFHDCFIRGCDASVLIDSTPGNQAEKDAPPNISLRSFYVIDEAKSKLETACPHSVSCADIVAIAARDIVTLSGGPYWSVLKGRKDGKISNASETINLPAPTFNVSQLIQSFANRGLQVKDLVALSGAHTLGFSHCSSFQSRLRNFSSIHDTDPTLESGFAQILKNKCPKPNLDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQSLFGDSRTKTIVESFANDQNLFFKEFAASMVKLGNVGVIENGNVRFNCRVVN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 12206483 12207834 - CmoCh18G012360.1 Cmo18g01236 403009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01236 320 Pfam Peroxidase 47 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 Gene3D - 28 320 - -
Cmo18g01236 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cmo18g01236 320 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PANTHER PEROXIDASE 66 8 319 - -
Cmo18g01236 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601|GO:0042744
Cmo18g01236 320 PANTHER PEROXIDASE 25-RELATED 8 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo18g01236 320 Gene3D Peroxidase, domain 2 160 301 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00159 Cmo-Chr2:771614 Cmo18g01236 Cmo-Chr18:12206483 1.18E-97 dispersed
Cmo03g00016 Cmo-Chr3:195965 Cmo18g01236 Cmo-Chr18:12206483 9.77E-96 dispersed
Cmo03g00688 Cmo-Chr3:6034619 Cmo18g01236 Cmo-Chr18:12206483 2.30E-119 dispersed
Cmo09g00394 Cmo-Chr9:1738150 Cmo18g01236 Cmo-Chr18:12206483 2.38E-75 dispersed
Cmo11g01911 Cmo-Chr11:13273050 Cmo18g01236 Cmo-Chr18:12206483 4.76E-88 dispersed
Cmo17g00979 Cmo-Chr17:8517822 Cmo18g01236 Cmo-Chr18:12206483 1.11E-71 dispersed
Cmo18g01236 Cmo-Chr18:12206483 Cmo15g00076 Cmo-Chr15:397875 6.16E-91 dispersed
Cmo20g00612 Cmo-Chr20:3001453 Cmo18g01236 Cmo-Chr18:12206483 4.89E-75 dispersed
Cmo18g01236 Cmo-Chr18:12206483 Cmo12g00345 Cmo-Chr12:2143584 4.13E-124 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01236 K00430 - csv:101210306 561.607