Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01250 ATGACTGAGGCCACGTTTGAAGTTCTCCCAAGACTCAACGAGATCAAATTTGGAAGTGGAGTTATGGATGAGCTTTTATTTCTGGACCGTCCACATGAAAGGAGCTTTCCTTCTGGAATTATGATGTTAGAATATCGAAAAGCAATTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGTCATCTTCGTATCATATTCACACAAGACTTGAAGATTTTGTCTTGGGAATTTTGTGCACGGCGTCATGAAGAACTTCTTCCACGTAGGTTGGTTGCACCTCAGGTATTGTTTTTGAATCTCATCAAACTTCTACTTGGAATAAAAGTAATATGGAGTGGACTGTTGTCTTTTTCAAATGAAGAGCATGCTTGGTTTTTTATGCACAAAAGGGAGCTAGGTAAAAGCCCATCTTATACTATCCTTCTAAAGGCCATCTTAAATTTCAGTTTTTCGTGTTGTCTTGTTACTTATCCTTCTTTCCTCTTATTTTTTCTTTTTCTACCTTTGAGATTGGCTTTCTATTTTTACTTTAAAGATAAGAATTTGATTAAACAAAATCAGTTACATTCTTGCAAGTCTTTCAGATGGAAAAAATACTTCAACGAGGTGAATCAGCTGTTACAGGTTGCCCAGAAAAGCCAAAGCACAATTGCTGAAAGTGGTCCTGATGGTGTCTCTCAGAAAGATTTGCAGGCAAATAGCAATATGGTACTGACGGCTGGTCGTCAGCTTGCTAAAAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCTCTAAAAGATACGTGAGATGCTTGCAGATATCAGAGGTTGTCAACAGAATGAAAGATCTGATTGGCTTCTGCCGAGATCAAAAAGTTGGGCCTATAGAGGGCTTGAAAAATTATCCCAGACATGCCACTGCAGCCAAGCTCCAGATTCAGAAAATGCAGGAGATGGAGCAATTAGCAAGCATTCAAGGTCTTCCCACAGATCGCAACACAATGAATAAGCTGATGGCAATGCATTCTGAGCTTGATAATCATGGGATTAACAACCATCAAATGATTGGTCGAGGAGGTATGAGTGGTTCACAAGCCGCTTTGGCACTGACTACATACCAGAATATGCTCATGAGACAAAGCTCTATGAATTCCAACCCGAGCCCACACCAACAGGAGGCCTCGTCTTCTTTCAATAATGCCAACTATAACCCATCCCCTACACTCCATGGGACTGCATCCTTGATGCCTGGATCTATACAGAACTCCTCTGTCGGTGGCTTTTCAAGCGTTCAGCAAACCTTGCAAAAGCAATCGCAGCAGCTGCAGCAGCATCCACCGAATACTGGCTCCTTGGTCCAACAAAATCATTCTCAGACAATTCAAGGTAGCCAGGCCATACAACAACAGATGATCCAACAACTACTGCAGATGTCAAGTAACAGTAAGAGTGGTGGTGCACAACAGCAGCCCCTGACCGGACCAAATGCAAATAGAAGTTTGGGAAGAAGGGGTATGAGTTTTGTGGGCAATAGTACATCAGTTGTAGCTGGGAGCAATGCCCCTGGCCCTGGCCCTGGCCCGAGTAGAAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAGTCCTCAGCTGGTAACAGTGGATTCAATCAGAAGGCTTCTGATTTGCAGCAAGATCTTCCTCTGCCTGAGGGTCTGGTAGAAGATATAGGCCAAGATTTCCCTGAAAATGGGTTTATAAACAATGACCTTGACGAGGATTTGGGTTATGTCTGGAAGGCTTGA 1776 42.96 MTEATFEVLPRLNEIKFGSGVMDELLFLDRPHERSFPSGIMMLEYRKAIQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVLFLNLIKLLLGIKVIWSGLLSFSNEEHAWFFMHKRELGKSPSYTILLKAILNFSFSCCLVTYPSFLLFFLFLPLRLAFYFYFKDKNLIKQNQLHSCKSFRWKKYFNEVNQLLQVAQKSQSTIAESGPDGVSQKDLQANSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNRMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQIQKMQEMEQLASIQGLPTDRNTMNKLMAMHSELDNHGINNHQMIGRGGMSGSQAALALTTYQNMLMRQSSMNSNPSPHQQEASSSFNNANYNPSPTLHGTASLMPGSIQNSSVGGFSSVQQTLQKQSQQLQQHPPNTGSLVQQNHSQTIQGSQAIQQQMIQQLLQMSSNSKSGGAQQQPLTGPNANRSLGRRGMSFVGNSTSVVAGSNAPGPGPGPSRSNSFKAASNSESSAGNSGFNQKASDLQQDLPLPEGLVEDIGQDFPENGFINNDLDEDLGYVWKA 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 12274697 12278889 + CmoCh18G012500.1 Cmo18g01250 403023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01250 591 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 205 585 - -
Cmo18g01250 591 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 3 100 - -
Cmo18g01250 591 MobiDBLite consensus disorder prediction 476 577 - -
Cmo18g01250 591 MobiDBLite consensus disorder prediction 502 554 - -
Cmo18g01250 591 MobiDBLite consensus disorder prediction 476 494 - -
Cmo18g01250 591 MobiDBLite consensus disorder prediction 377 463 - -
Cmo18g01250 591 PANTHER LIM DOMAIN-BINDING PROTEIN 205 585 IPR029005 -
Cmo18g01250 591 PANTHER LIM DOMAIN-BINDING PROTEIN 3 100 IPR029005 -
Cmo18g01250 591 Pfam LIM-domain binding protein 207 297 IPR029005 -
Cmo18g01250 591 Pfam LIM-domain binding protein 3 98 IPR029005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo15g01487 Cmo18g01250 CCT
Cmo15g01487 Cmo18g01250 ECH
Cmo16g00152 Cmo18g01250 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g01250 Cmo-Chr18:12274697 Cmo16g00152 Cmo-Chr16:686930 7.62E-47 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01250 - - csv:105434391 589.341