Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g01273 | ATGGTGGTAATTAGTCTCTCCATTGGGTCAATTACATGGGTTTTAGTTATGGTTTTGTTCGTGAAAGTGGTGGTTTCATGGTGGGTTTTGCCTGTTTTGGCTCATCAAAAGTTGAAGCGTAATGGGTTTCGAGGTCCTCCTCCAAGCTTTCCTCTTGGAAACATTGCTGAGATGAAGAGGATAAGGAAAGCTTCCGCCGCCATTAATGGCGATGCTCATTCCTTCCCTTCTTCCAAGGTCTCCCATGATATTCATTCCACTGTTTTCCCTCACTTCGCTCAATGGCAGGCCTCTTATGGGAAGAAGTTTATATATTGGTTGGGGACAGAGCCATTTTTATACATTGCAGACCCACACTTTATGAAGAAGATTTCTGAAGCTGTGATGGCAAAGGGTTGGGGGAAGCCAGCCGTGTTCCGAAACGATAGGAGACCAATGTTCGGCGATGGCCTTGTCATGACCGAAGGCGACGACTGGGTTCGCCATCGACACATTCTCACTCCCGCTTTCAACCCCGCTAACTTGAAGGCAATGACAAAGTTCATGGTGGAGTCCACCACTAAAATGCTAAACAAGTGGAGCAGCCTCGTAAACTCCGCCGGTGGCGAAATCGACGTGGAGAGAGAAATCACGGCCACCGCCGGCGACATTATCGCAGAGGCCAGCTTCGGAATTTGCAACGATGGCGGCCGAGACGCCTTCGACTACCTCAGAGCTCTTCAGTTCACTCTCTTCCAAAACAGCACTTACGTGGGCGTTCCTTTCAGCAGCCTTTTTTTCTGCCCGGGCCGAACCCTAAGCGCCAAGCGACTTGGCGCTGCAATTGACCGCCTCTTTTTATCCTTAGTGTCGAAGAGGAAACTGTCGCAGGATTCCTCCTCTGATTTGCTCAGCCGCTTGATTGAGGGTGAGAAGAGCACCGGCGACGGCGGAAAGATGGGGCTGACGACAAGAGAATTGGTGGACGAGTGCAAGACTTTCTTCTTTGGCGGCCATGAGACGACGGCGCTGGCGACTAGTTGGACACTCCTGCTTCTGGCAACGCGGCCGGAGTGGCAAGATATTTTACGAGAGGAAATCAAAGAGGTTATTGGAGATAAGGAAATTGATTTCAACATGCTTTCTGGACTCAAAAAGATGGGATGCGTATTCAGTGAAGTACTTAGGCTATACCCATCAGCTCCTAACATACAAAGACAAGCAAAAGGAGACATTGATGTTGGGAGCATGACCATCCCAAAAGGGACCAACATATGGATAGACATCGTCGCAATGCATCGCGACCCGGATCTATGGGGCGACGACGCGAATGAGTTCAAGCCAGAGCGGTTCGTGGAGGACAGCATTCGTGGCGGGTGCAACCACAAGATGGGATATTTGCCATTTGGATTTGGAGGGAGAATGTGCATTGGTAAAAACTTGTCCTCTATGGAGTATAAGATTGTGTTAACGCTAATTCTCTCTAGGTTTTCACTCTCTCTGTCTCCTAATTATGCTCATTCTCCTGCAACTTTGCTCTCTTTGAGACCTGCCCATGGCCTTCCTCTCATTGTAACCCCCCTTCACCCGTAA | 1572 | 49.36 | MVVISLSIGSITWVLVMVLFVKVVVSWWVLPVLAHQKLKRNGFRGPPPSFPLGNIAEMKRIRKASAAINGDAHSFPSSKVSHDIHSTVFPHFAQWQASYGKKFIYWLGTEPFLYIADPHFMKKISEAVMAKGWGKPAVFRNDRRPMFGDGLVMTEGDDWVRHRHILTPAFNPANLKAMTKFMVESTTKMLNKWSSLVNSAGGEIDVEREITATAGDIIAEASFGICNDGGRDAFDYLRALQFTLFQNSTYVGVPFSSLFFCPGRTLSAKRLGAAIDRLFLSLVSKRKLSQDSSSDLLSRLIEGEKSTGDGGKMGLTTRELVDECKTFFFGGHETTALATSWTLLLLATRPEWQDILREEIKEVIGDKEIDFNMLSGLKKMGCVFSEVLRLYPSAPNIQRQAKGDIDVGSMTIPKGTNIWIDIVAMHRDPDLWGDDANEFKPERFVEDSIRGGCNHKMGYLPFGFGGRMCIGKNLSSMEYKIVLTLILSRFSLSLSPNYAHSPATLLSLRPAHGLPLIVTPLHP | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 12375086 | 12377961 | + | CmoCh18G012730.1 | Cmo18g01273 | 403046 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g01273 | 523 | Pfam | Cytochrome P450 | 89 | 497 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PRINTS | P450 superfamily signature | 330 | 347 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PRINTS | P450 superfamily signature | 382 | 393 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PRINTS | P450 superfamily signature | 460 | 469 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PRINTS | P450 superfamily signature | 469 | 480 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 10 | 517 | - | - | |
Cmo18g01273 | 523 | PRINTS | E-class P450 group I signature | 96 | 115 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PRINTS | E-class P450 group I signature | 319 | 336 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PRINTS | E-class P450 group I signature | 339 | 365 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PRINTS | E-class P450 group I signature | 422 | 446 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PRINTS | E-class P450 group I signature | 459 | 469 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PRINTS | E-class P450 group I signature | 469 | 492 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 462 | 471 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo18g01273 | 523 | Gene3D | Cytochrome P450 | 29 | 522 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo18g01273 | 523 | PANTHER | CYTOCHROME P450 FAMILY 72 PROTEIN | 10 | 517 | - | - | |
Cmo18g01273 | 523 | SUPERFAMILY | Cytochrome P450 | 86 | 520 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g01087 | Cmo18g01273 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo18g01273 | Cmo-Chr18:12375086 | Cmo15g00197 | Cmo-Chr15:906216 | 2.86E-101 | dispersed | |
Cmo18g01273 | Cmo-Chr18:12375086 | Cmo02g01087 | Cmo-Chr2:6598707 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g01273 | - | - | csv:101220942 | 760.37 |