Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01274 ATGAATCCAGCCGCCTTCGGAGCTCCATTCCTAGCAGTTCTGTTTCTTCTTGCTGCAGCGCTACGGTCACTACCGCTCGCCGGAGCACGGCTTCAGGTGGCGATGACGGTGGTTAGAAATGCCTCTTCCGTCGGAGCCTTTTGTTTGGACGGCAGCTTGCCGGCGTACCACCTCGACAGGGGATTCGGCGCCGGAGCCGGAAACTGGCTTCTACAGTTCGAGGGAGGTGGGTGGTGCAATGACGTGGAGTCCTGTTTGGAGAGAGCCAAGAGCCGTAGAGGTTCAACGCAGTTGATGGACAAATGGGAAGACTTCAATGATTTTTATAACTGGAACCGTGTGAAGCTGAGGTACTGTGACGGAGCCTCATTTGGAGGAGATGCATTGTTCCACAACGGGACATCGCCGCTTTATTTCAAAGGCCAAAAGATATGGGAATCCATCCTTCTTGACCTTCTACCAAAAGGGTTGGGGACAGCAAATAAGGCTTTGCTTTCTGGTTGCTCAGCTGGGGGTCTAGCAACGTTTCTGCACTGTGAAGATTTCACCAACTATTTACCAAGAAACGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTACAAGACATTGGTTCAACACACACCATGAGGGGCTTCTTTAAGGATCTTGTGGCTCTCCAGGGAATGAAGCCAAATCTGAATGGAAACTGCACAGCCTCTTCTAACCTTCCAGATTTGTGCATATTCCCACAGTATGCCTTGAAGTACATAGCCACACCGTTTTTCATTCTGAATTCAGCTTATGATGTTTACCAATTTCATCATGGATTGGTGCCGCCATCTGCTGATGTACATGGACGATGGAAACACTGCAAAATGAATCCAGCAGCCTGTAGTAAGCAACAGATTGAGCAGCTGCAAGTCGAGCGATTTCTCGACCAACAGTTCATAGATTCGAATCATGTTGTTGAGCTAAAGACAACAGCATTTTAG 984 48.37 MNPAAFGAPFLAVLFLLAAALRSLPLAGARLQVAMTVVRNASSVGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVESCLERAKSRRGSTQLMDKWEDFNDFYNWNRVKLRYCDGASFGGDALFHNGTSPLYFKGQKIWESILLDLLPKGLGTANKALLSGCSAGGLATFLHCEDFTNYLPRNATVKCLSDAGFFLDLQDIGSTHTMRGFFKDLVALQGMKPNLNGNCTASSNLPDLCIFPQYALKYIATPFFILNSAYDVYQFHHGLVPPSADVHGRWKHCKMNPAACSKQQIEQLQVERFLDQQFIDSNHVVELKTTAF 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 12377830 12382128 - CmoCh18G012740.1 Cmo18g01274 403047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01274 327 Pfam Pectinacetylesterase 30 304 IPR004963 GO:0016787
Cmo18g01274 327 PANTHER PECTIN ACETYLESTERASE 9 29 305 - -
Cmo18g01274 327 PANTHER NOTUM-RELATED 29 305 IPR004963 GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo16g00130 Cmo18g01274 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00560 Cmo-Chr16:2729529 Cmo18g01274 Cmo-Chr18:12377830 4.58E-86 dispersed
Cmo16g00130 Cmo-Chr16:605501 Cmo18g01274 Cmo-Chr18:12377830 5.86E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01274 K19882 - csv:101216160 502.286