Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01298 ATGGCGGCCGGCCTCTCCGCCGTCTTAGGGCCCAAACCATTCCATGTCTTCCTTACTTCCTCCAATCTCTCCCCTAAACCTCGAACTCCGTTTCTGTTTCCATCTTCGGTCTTCCGGAACAGTAGAATCCAATGGAAGATGCGGAGAAAAACGCTGCTCACCGTCTGCGTCCTCGTTGAGGATCAGAGTAGTTCCAGCGAGGTGGAAAATCTCGCAGATGAAAAATTACCGATTATAGTCCCTCAGATCCCATCGCCTCATGTTGCAGAGAAATTAGCGAGGAAGAAATCGGAGCGCTTCACTTATCTTGTTGCTGCAGTTATGTCTAGTTTTGGAATTACTTCCATGGCTGTCATGGCAGTTTACTACCGATTTCACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTGCTCTCTCCGTTGGTGCCGCAGTCGGCATGGAGTTTTGGGCAAGATGGGCACATAGGGCTCTCTGGCACGCTTCCTTGTGGCATATGCACGAGTCTCACCACAAACCAAGAGAAGGACCGTTCGAATTGAACGATGTTTTCGCCATAACCAACGCCGTGCCCGCCATAGCTCTCCTCTCTTACGGCTTCTTCCATAAAGGCCTCGTCCCTGGTCTCTGCTTCGGCGCAGGCCTTGGAATTACTGTGTTTGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCACAAAAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTACTTCAGAAAGGTCGCTGCTGCTCACCAGCTTCATCATTCGGAAAAGTTCAACGGTGTTCCGTACGGGCTGTTTTTGGGTCCAAAGGAATTAGAGGAAGTGGGAGGCCTACAAGAATTGGAGAAGGAAATCAACAGAAGAACAAAATCAACGGCCAAAAAACCAATCAACGGTTCTTGA 933 50.05 MAAGLSAVLGPKPFHVFLTSSNLSPKPRTPFLFPSSVFRNSRIQWKMRRKTLLTVCVLVEDQSSSSEVENLADEKLPIIVPQIPSPHVAEKLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFHWQMEGGEIPFSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHKPREGPFELNDVFAITNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSEKFNGVPYGLFLGPKELEEVGGLQELEKEINRRTKSTAKKPINGS 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 12476386 12479058 - CmoCh18G012980.1 Cmo18g01298 403071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01298 310 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 16 301 IPR045019 GO:0016491
Cmo18g01298 310 Pfam Fatty acid hydroxylase 149 276 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cmo18g01298 310 PANTHER BETA-CAROTENE HYDROXYLASE 16 301 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo16g00108 Cmo18g01298 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01313 Cmo-Chr15:9019551 Cmo18g01298 Cmo-Chr18:12476386 3.49E-129 wgd
Cmo16g00108 Cmo-Chr16:494904 Cmo18g01298 Cmo-Chr18:12476386 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01298 K15746 - csv:101212140 563.533