Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g01376 | ATGGGGTCCTCGGGGCAAGGTTGTGAGGTCCAGATCACCCCCACCACCCAAGTGAGCGATGAAGAAGCACAGCTGTTCGCTATGCAGTTGGCGAGCGCTTCGGTTCTTCCAATGGTGCTGAAGGCCGCCATCGAGCTAGACGTGCTGGAGATCATTGCGGCGGCAGGGGAGGGGGCTTTGTTGTCCCCCTCACAAATTGCCTCTCACCTCTCCTTCTCCGGGGCCAAAACCCCAAACCCTGAGGCGGGTGTGGTTCTGGACCGCATGCTCCGGTTGCTGGCTTCCTACTCCATCCTCACTTACTCCCTCAATACTCTCCCCGATGGCTCACTCCAGAGGCTCTACGGCCTCGCCCCTGTAGCCAAGTTCTTGGTCAAGAATCAAGACGGCGTCTCCATCGCTCCCCTGTGTCTCATGAACCAGGACAAGGTCCTCATGGAGAGCTGGTACCATTTGAAAGATGCGGTACTGGAAGGAGGGATTCCATTCAACAAAGCATACGGAATGACGGCGTTCGAATATCATGGAACAGATCCGAGATTCAACAGGGTGTTCAACAGGGGAATGTCCGACCATTCCACCATTACCATGAAGAAGATTCTAGAGACCTACAAAGGCTTCGAAGGCCTTAATTCAGTGGTGGATGTGGGCGGTGGGACCGGAGCTGTTCTCAACATGATAGTCTCCAAGTACCCTTCTATTAGGGGCATCAACTTCGACCTCCCTCATGTCATTCAGGACGCCCCTGCCTACCCAGGAGTCCAACATGTTGGGGGCGACATGTTTGTGAGCGTCCCAAAGGGGGATGCTATTTTCATGAAGTGGATCTGTCACGATTGGAGCGACCAGCACTGCCTGAAATTGTTGAAGAATTGCCACGATTCTCTGCCGGAGCATGGGAAGGTGATTGTGGCGGAATGCATTCTTCCGGATGCACCAGACAGCAGCCTTGCCACCAAGGGAGTGATTCACATCGATGTCATAATGCTGGCTCACAACCCTGGAGGCAAAGAAAGGACCGAGCAGGAGTTCCACGCCTTGGGCAAGGCTGCTGGATTTCAAGGCTTCAAGGTCCACTCTTGTGCTTTCAACACATACATCATGGAATTTCTCAAGACTCTTTAG | 1125 | 53.69 | MGSSGQGCEVQITPTTQVSDEEAQLFAMQLASASVLPMVLKAAIELDVLEIIAAAGEGALLSPSQIASHLSFSGAKTPNPEAGVVLDRMLRLLASYSILTYSLNTLPDGSLQRLYGLAPVAKFLVKNQDGVSIAPLCLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNRVFNRGMSDHSTITMKKILETYKGFEGLNSVVDVGGGTGAVLNMIVSKYPSIRGINFDLPHVIQDAPAYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDQHCLKLLKNCHDSLPEHGKVIVAECILPDAPDSSLATKGVIHIDVIMLAHNPGGKERTEQEFHALGKAAGFQGFKVHSCAFNTYIMEFLKTL | 374 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 12845400 | 12847758 | - | CmoCh18G013760.1 | Cmo18g01376 | 403149 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g01376 | 374 | CDD | AdoMet_MTases | 213 | 304 | - | - | |
Cmo18g01376 | 374 | Pfam | O-methyltransferase domain | 149 | 354 | IPR001077 | GO:0008171 | |
Cmo18g01376 | 374 | Pfam | Dimerisation domain | 38 | 94 | IPR012967 | GO:0046983 | |
Cmo18g01376 | 374 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 129 | 370 | IPR029063 | - | |
Cmo18g01376 | 374 | PANTHER | BNAA10G07270D PROTEIN | 6 | 372 | - | - | |
Cmo18g01376 | 374 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 28 | 372 | IPR016461 | GO:0008168 | |
Cmo18g01376 | 374 | PANTHER | O-METHYLTRANSFERASE | 6 | 372 | IPR016461 | GO:0008168 | |
Cmo18g01376 | 374 | PIRSF | O-mtase | 7 | 372 | IPR016461 | GO:0008168 | |
Cmo18g01376 | 374 | Gene3D | - | 7 | 124 | IPR036388 | - | |
Cmo18g01376 | 374 | SUPERFAMILY | Winged helix DNA-binding domain | 19 | 127 | IPR036390 | - | |
Cmo18g01376 | 374 | Gene3D | Vaccinia Virus protein VP39 | 125 | 372 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00413 | Cmo-Chr6:1987121 | Cmo18g01376 | Cmo-Chr18:12845400 | 1.40E-81 | dispersed | |
Cmo06g00698 | Cmo-Chr6:3540073 | Cmo18g01376 | Cmo-Chr18:12845400 | 3.47E-141 | dispersed | |
Cmo06g00699 | Cmo-Chr6:3544733 | Cmo18g01376 | Cmo-Chr18:12845400 | 1.18E-80 | dispersed | |
Cmo18g01376 | Cmo-Chr18:12845400 | Cmo02g00114 | Cmo-Chr2:598108 | 6.81E-74 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g01376 | K13066 | - | csv:101204109 | 634.795 |