Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g01376 ATGGGGTCCTCGGGGCAAGGTTGTGAGGTCCAGATCACCCCCACCACCCAAGTGAGCGATGAAGAAGCACAGCTGTTCGCTATGCAGTTGGCGAGCGCTTCGGTTCTTCCAATGGTGCTGAAGGCCGCCATCGAGCTAGACGTGCTGGAGATCATTGCGGCGGCAGGGGAGGGGGCTTTGTTGTCCCCCTCACAAATTGCCTCTCACCTCTCCTTCTCCGGGGCCAAAACCCCAAACCCTGAGGCGGGTGTGGTTCTGGACCGCATGCTCCGGTTGCTGGCTTCCTACTCCATCCTCACTTACTCCCTCAATACTCTCCCCGATGGCTCACTCCAGAGGCTCTACGGCCTCGCCCCTGTAGCCAAGTTCTTGGTCAAGAATCAAGACGGCGTCTCCATCGCTCCCCTGTGTCTCATGAACCAGGACAAGGTCCTCATGGAGAGCTGGTACCATTTGAAAGATGCGGTACTGGAAGGAGGGATTCCATTCAACAAAGCATACGGAATGACGGCGTTCGAATATCATGGAACAGATCCGAGATTCAACAGGGTGTTCAACAGGGGAATGTCCGACCATTCCACCATTACCATGAAGAAGATTCTAGAGACCTACAAAGGCTTCGAAGGCCTTAATTCAGTGGTGGATGTGGGCGGTGGGACCGGAGCTGTTCTCAACATGATAGTCTCCAAGTACCCTTCTATTAGGGGCATCAACTTCGACCTCCCTCATGTCATTCAGGACGCCCCTGCCTACCCAGGAGTCCAACATGTTGGGGGCGACATGTTTGTGAGCGTCCCAAAGGGGGATGCTATTTTCATGAAGTGGATCTGTCACGATTGGAGCGACCAGCACTGCCTGAAATTGTTGAAGAATTGCCACGATTCTCTGCCGGAGCATGGGAAGGTGATTGTGGCGGAATGCATTCTTCCGGATGCACCAGACAGCAGCCTTGCCACCAAGGGAGTGATTCACATCGATGTCATAATGCTGGCTCACAACCCTGGAGGCAAAGAAAGGACCGAGCAGGAGTTCCACGCCTTGGGCAAGGCTGCTGGATTTCAAGGCTTCAAGGTCCACTCTTGTGCTTTCAACACATACATCATGGAATTTCTCAAGACTCTTTAG 1125 53.69 MGSSGQGCEVQITPTTQVSDEEAQLFAMQLASASVLPMVLKAAIELDVLEIIAAAGEGALLSPSQIASHLSFSGAKTPNPEAGVVLDRMLRLLASYSILTYSLNTLPDGSLQRLYGLAPVAKFLVKNQDGVSIAPLCLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNRVFNRGMSDHSTITMKKILETYKGFEGLNSVVDVGGGTGAVLNMIVSKYPSIRGINFDLPHVIQDAPAYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDQHCLKLLKNCHDSLPEHGKVIVAECILPDAPDSSLATKGVIHIDVIMLAHNPGGKERTEQEFHALGKAAGFQGFKVHSCAFNTYIMEFLKTL 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 12845400 12847758 - CmoCh18G013760.1 Cmo18g01376 403149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g01376 374 CDD AdoMet_MTases 213 304 - -
Cmo18g01376 374 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Cmo18g01376 374 Pfam Dimerisation domain 38 94 IPR012967 GO:0046983
Cmo18g01376 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 370 IPR029063 -
Cmo18g01376 374 PANTHER BNAA10G07270D PROTEIN 6 372 - -
Cmo18g01376 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 372 IPR016461 GO:0008168
Cmo18g01376 374 PANTHER O-METHYLTRANSFERASE 6 372 IPR016461 GO:0008168
Cmo18g01376 374 PIRSF O-mtase 7 372 IPR016461 GO:0008168
Cmo18g01376 374 Gene3D - 7 124 IPR036388 -
Cmo18g01376 374 SUPERFAMILY Winged helix DNA-binding domain 19 127 IPR036390 -
Cmo18g01376 374 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00413 Cmo-Chr6:1987121 Cmo18g01376 Cmo-Chr18:12845400 1.40E-81 dispersed
Cmo06g00698 Cmo-Chr6:3540073 Cmo18g01376 Cmo-Chr18:12845400 3.47E-141 dispersed
Cmo06g00699 Cmo-Chr6:3544733 Cmo18g01376 Cmo-Chr18:12845400 1.18E-80 dispersed
Cmo18g01376 Cmo-Chr18:12845400 Cmo02g00114 Cmo-Chr2:598108 6.81E-74 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g01376 K13066 - csv:101204109 634.795