Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00057 ATGGCTGGAGATGGATTTGGATTCCCTGTGGAATCTCAGGCGGTTTCGGTGAAGAAGAAGACGGCGGCGACCACCACGACCACGACGAAGAAGAAGAATACTGTAGTTTCCAGGAGCTGGGTTTCGTTGGACCATGAAGGAAGGAGTACGGTTTTGGACGTGGATAAGTATGCGATTATGCAGAGAGTTCAGATTAATGCGAGAGATCTTCGGCTTCTTGATCCTCTGTTGTCGTATCCTTCCACTATCTTGGGGAGAGAAAGCGTGATTGTTCTCAATTTGGAGGTGCTGCTTAGAGACCCAATGGATGAAAATGTAGTTCCAATTGTTGAAGAATTGCAGAGACGGTTGCCTTCCACAAATTCCCTGTACCAAGGACAAGGGGAAGAAGAAGAGCCTTCCCACACCCAAAATGAGTTGGCTGAAAACGAATTTCCATTTGAGTTTCGTGCTTTAGAGGTCGCATTAGAAGCAATTTGTAGTTTTCTTGATGCACGCACAAGAGAACTGGAGACTGATACGTATCCTGCTTTAGATGAGCTGACCTCCAAGATTAGCAGTCGTAACTTGGATCGAGTGCGCAAGCTGAAGAGTGCAATGACAAGGTTGACAAATCGGGTGCAAAAGGTTAGGGATGAGCTTGAACAACTTCTGGATGACGACGACGACATGGCAGAGCTGTACTTGTCACGAAAAGTAGCTGGCACCCCTGAAAGCGGCTCTGGGACTCCAATTTGGTTTCTTGCTTCTCCTAAGGACTATTCAAAGATGTCTAAAACAAGTAGAGCAAGTGCAATTACTTTTCGAGGAGAGAATGATGTTGAGGAACTAGAAATGTTACTCGAGGCTTATTTTATGCAGATTGAAGGTACATTAAACAAACTAATCACGTTGCGGGAATACATCGATGACACAGAGGATTACATCAATATTCAGCTTGAACTCTTTTTGAGCTCTGGGACTGTTTGTTTGTCTATTTATTCTTTAGTGACTGCGATATTTGGAATGAATATCCCATATACCTGGAAGGAAGATCATGAACATGTATTCAAATGGGTGGTCATCCTGACAGGAATAGTTTGTGCAACCATTTATGTGTCACTAAGCTCGTATGCACGATCCAAAGGTCTTGTTGGATCTTGA 1143 43.92 MAGDGFGFPVESQAVSVKKKTAATTTTTTKKKNTVVSRSWVSLDHEGRSTVLDVDKYAIMQRVQINARDLRLLDPLLSYPSTILGRESVIVLNLEVLLRDPMDENVVPIVEELQRRLPSTNSLYQGQGEEEEPSHTQNELAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGTPESGSGTPIWFLASPKDYSKMSKTSRASAITFRGENDVEELEMLLEAYFMQIEGTLNKLITLREYIDDTEDYINIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWKEDHEHVFKWVVILTGIVCATIYVSLSSYARSKGLVGS 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 317618 322053 + CmoCh19G000570.1 Cmo19g00057 403217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00057 380 CDD Mrs2_Mfm1p-like 40 377 IPR039204 -
Cmo19g00057 380 Coils Coil 193 220 - -
Cmo19g00057 380 Gene3D Magnesium transport protein CorA, transmembrane region 97 315 - -
Cmo19g00057 380 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 25 380 IPR039204 -
Cmo19g00057 380 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 316 367 IPR045863 -
Cmo19g00057 380 Gene3D - 23 96 - -
Cmo19g00057 380 Gene3D Magnesium transport protein CorA, transmembrane region 317 371 - -
Cmo19g00057 380 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 25 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01086 Cmo-Chr8:6985242 Cmo19g00057 Cmo-Chr19:317618 1.75E-154 dispersed
Cmo19g00057 Cmo-Chr19:317618 Cmo16g00423 Cmo-Chr16:1976093 6.12E-74 dispersed
Cmo19g00057 Cmo-Chr19:317618 Cmo17g00183 Cmo-Chr17:1083418 8.03E-178 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00057 K16075 - csv:101220452 643.269