Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00091 ATGACAGGTTCTGGTTCTCCCTGTGGAGCCTGTAAGTTCTTGAGAAGAAAATGTGTCAGAGGCTGCGTTTTTGCGCCATATTTCTGCCATGAACAAGGCGCTACTCATTTTGCTGCTATTCATAAGGTGTTTGGCGCTAGCAATGTGTCTAAGCTTCTTGCTCGTTTGCCTGTTAGTGAGCGCTGTGAGGCTGCTGTTACTATCTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTTGTGAGTCTTCAAGCACAACTAGCTTCTCTTAAGGAACAAGCAGCAGAAAACATGATGAACGTATCTGGTAATAGAGGTGAGGCTGAGAAGAATAGCAGAAAGGTTCCTTGTCATCCACAAGATCTCCATAGCTGGTTTCAGTCAGAGCAACCGAACGTAATGCTCGAGTTCAATCCGAATCCGACTCGGAACAATTCGGCATCGAACCCTTATTATGATGAGAATTATAGCATTATGGTTAATTCTCAGTCCAATGAGAACTATGAGCATCACATGGCTAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGCTATTCCATGTATACTCTTGATCACTTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCAGTTGCTTTTGGTAATAGGCATTGGTAA 717 42.68 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRGEAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 504806 506060 - CmoCh19G000910.1 Cmo19g00091 403251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00091 238 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Cmo19g00091 238 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 235 - -
Cmo19g00091 238 Coils Coil 87 114 - -
Cmo19g00091 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN-RELATED 1 235 - -
Cmo19g00091 238 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01800 Cmo19g00091 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01800 Cmo-Chr2:10225373 Cmo19g00091 Cmo-Chr19:504806 1.12E-151 dispersed
Cmo08g00269 Cmo-Chr8:1684199 Cmo19g00091 Cmo-Chr19:504806 3.40E-57 dispersed
Cmo19g00089 Cmo-Chr19:498897 Cmo19g00091 Cmo-Chr19:504806 2.57E-56 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11584 PF03195 LOB 5.40E-36 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00091 K13945 - csv:101214764 423.705