Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo19g00098 | ATGGGAAAGGAGTCATTACAAGTACTAAATGCATTAGATGTTGCCAAAACACAATGGTACCATTTTACAGCAATCATTATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTATTCTGTATATCTCTTGTCACTAAATTACTTGGAAGAATCTACTATCATGTTGATGGTGCGCCAAAGCCTGGATCATTGCCTCCAAACGTTGCTGCTGCTGTTAATGGTGTGGCGTTCTGTGGAACGTTGGCAGGGCAACTCTTCTTCGGCTGGTTGGGTGATAAAATGGGGCGAAAACGAGTCTATGGCGTAACTCTAATGCTGATGGTTGTTTGTTCCATAGGCTCTGGCCTCTCCTTTGGCCATAATTCACAATCTGTCATGACTACTTTATGCTTCTTTCGATTCTGGCTTGGGTTCGGTATTGGTGGCGATTACCCTCTTTCGGCAACGATCATGTCGGAATACTCGAATAAGAAGACTCGTGGTGCGTTCATTGCTGCTGTGTTTGCTATGCAGGGGTTTGGAATTTTGGGTGGAGGGATATTCGCCGTTTTCATCTCTATGGTATTTAAGGCCAAGTTTGATGCTCCAGCTTATGCAGTTGATCCTGTTGCCTCCACTGTGCCCCAAGCTGATTATATTTGGAGGATTATACTAATGGTTGGAGCTCTCCCTGCTGCTCTTACTTACTACTGGAGGATGAAAATGCCCGAAACTGCACGCTACACGGCGCTTGTAGCGAAAGATACAGCCCAAGCTGCATCAGACATGTCAAAAGTTTTGCATATGGATATCGAGGCAGAAACTCCAGAGCCTGCTCAGTGTCAGGGTCATGCTCGAAAGTGGGAACTAGAGTCTGCTCAGTGTCAGGGTCATGCTCGAAAGTGCGATCGTGACACTCAGCAGCTGCGAAATGCGTATGGATTGTTCTCGAAAGAGTTTCTTCGTTGTCATGGAACTCACTTACTTGGAACTGCAATTACTTGGTTTTTATTTGACATTGCATTCTACAGCCAGAACTTATTCCAGAAAGATATCTTCACCGCAATTGGATGGATTCCTCCGGCAGCCACCATGAATGCAGTTGAAGAAGTCTTCAGAATAGCAAGAGCTCAAACATTGATAGCCCTGTGCAGCACTGTGCCTGGCTACTGGTTCACAGTGGCTTTCATTGACAGAATTGGAAGATTTACCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTTTAGCCATTCCATACCATCACTGGACTTTGAAGGACAATCAAATAGGCTTCATAGTCCTCTACTCACTGACGTTCTTCTTCGCCAACTTCGGACCGAACGCAACCACTTTCGTCGTCCCAGCTGAAATCTTTCCAGCACGATTCCGTTCTACTTGCCATGGGATATCAGCAGCATCTGGGAAGCTCGGAGCTATGGTGGGTGCATTTGGTTTTCTATATTTGGCTCAAAGCCCGGACAAGAACAGAACCGATGCAGGATATCCTCCAGGCATTGGAGTCAAGAACTCGCTTCTTTTTCTGGGTGGACTTAACTTGTTGGGAATGTTGTTTACTTTTCTGGTGCCTGAAGCCAAGGGAAAATCATTGGAAGAGATGTCCGGCGAGAACGAAGATGGAACCATTGAAGAACTTGGGAGGCAGACACTTAGCCATAGAACAGTTTCAGAGGCTTAA | 1692 | 45.51 | MGKESLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAPKPGSLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGVTLMLMVVCSIGSGLSFGHNSQSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAVFISMVFKAKFDAPAYAVDPVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETARYTALVAKDTAQAASDMSKVLHMDIEAETPEPAQCQGHARKWELESAQCQGHARKCDRDTQQLRNAYGLFSKEFLRCHGTHLLGTAITWFLFDIAFYSQNLFQKDIFTAIGWIPPAATMNAVEEVFRIARAQTLIALCSTVPGYWFTVAFIDRIGRFTIQLMGFFFMTVFMFALAIPYHHWTLKDNQIGFIVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQSPDKNRTDAGYPPGIGVKNSLLFLGGLNLLGMLFTFLVPEAKGKSLEEMSGENEDGTIEELGRQTLSHRTVSEA | 563 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 552994 | 554685 | + | CmoCh19G000980.1 | Cmo19g00098 | 403258 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo19g00098 | 563 | CDD | MFS_PhT | 25 | 531 | - | - | |
Cmo19g00098 | 563 | MobiDBLite | consensus disorder prediction | 536 | 563 | - | - | |
Cmo19g00098 | 563 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED | 1 | 547 | - | - | |
Cmo19g00098 | 563 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 24 | 532 | IPR020846 | GO:0022857 | |
Cmo19g00098 | 563 | MobiDBLite | consensus disorder prediction | 536 | 551 | - | - | |
Cmo19g00098 | 563 | Gene3D | MFS general substrate transporter like domains | 300 | 554 | IPR036259 | - | |
Cmo19g00098 | 563 | Gene3D | MFS general substrate transporter like domains | 20 | 265 | IPR036259 | - | |
Cmo19g00098 | 563 | SUPERFAMILY | MFS general substrate transporter | 12 | 539 | IPR036259 | - | |
Cmo19g00098 | 563 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 1 | 547 | - | - | |
Cmo19g00098 | 563 | TIGRFAM | 2A0109: phosphate:H+ symporter | 11 | 541 | IPR004738 | GO:0005315|GO:0006817|GO:0016021 | |
Cmo19g00098 | 563 | Pfam | Sugar (and other) transporter | 26 | 539 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g01793 | Cmo19g00098 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo19g00098 | Cmo-Chr19:552994 | Cmo10g00655 | Cmo-Chr10:3010383 | 2.81E-11 | dispersed | |
Cmo19g00098 | Cmo-Chr19:552994 | Cmo19g00099 | Cmo-Chr19:556665 | 0 | tandem | |
Cmo14g01847 | Cmo-Chr14:13968135 | Cmo19g00098 | Cmo-Chr19:552994 | 0 | wgd | |
Cmo17g00165 | Cmo-Chr17:963739 | Cmo19g00098 | Cmo-Chr19:552994 | 0 | wgd | |
Cmo19g00098 | Cmo-Chr19:552994 | Cmo02g01793 | Cmo-Chr2:10195085 | 0 | wgd | |
Cmo19g00098 | Cmo-Chr19:552994 | Cmo06g01332 | Cmo-Chr6:9921850 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo19g00098 | K08176 | - | qsu:111998651 | 892.878 |