Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00098 ATGGGAAAGGAGTCATTACAAGTACTAAATGCATTAGATGTTGCCAAAACACAATGGTACCATTTTACAGCAATCATTATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTATTCTGTATATCTCTTGTCACTAAATTACTTGGAAGAATCTACTATCATGTTGATGGTGCGCCAAAGCCTGGATCATTGCCTCCAAACGTTGCTGCTGCTGTTAATGGTGTGGCGTTCTGTGGAACGTTGGCAGGGCAACTCTTCTTCGGCTGGTTGGGTGATAAAATGGGGCGAAAACGAGTCTATGGCGTAACTCTAATGCTGATGGTTGTTTGTTCCATAGGCTCTGGCCTCTCCTTTGGCCATAATTCACAATCTGTCATGACTACTTTATGCTTCTTTCGATTCTGGCTTGGGTTCGGTATTGGTGGCGATTACCCTCTTTCGGCAACGATCATGTCGGAATACTCGAATAAGAAGACTCGTGGTGCGTTCATTGCTGCTGTGTTTGCTATGCAGGGGTTTGGAATTTTGGGTGGAGGGATATTCGCCGTTTTCATCTCTATGGTATTTAAGGCCAAGTTTGATGCTCCAGCTTATGCAGTTGATCCTGTTGCCTCCACTGTGCCCCAAGCTGATTATATTTGGAGGATTATACTAATGGTTGGAGCTCTCCCTGCTGCTCTTACTTACTACTGGAGGATGAAAATGCCCGAAACTGCACGCTACACGGCGCTTGTAGCGAAAGATACAGCCCAAGCTGCATCAGACATGTCAAAAGTTTTGCATATGGATATCGAGGCAGAAACTCCAGAGCCTGCTCAGTGTCAGGGTCATGCTCGAAAGTGGGAACTAGAGTCTGCTCAGTGTCAGGGTCATGCTCGAAAGTGCGATCGTGACACTCAGCAGCTGCGAAATGCGTATGGATTGTTCTCGAAAGAGTTTCTTCGTTGTCATGGAACTCACTTACTTGGAACTGCAATTACTTGGTTTTTATTTGACATTGCATTCTACAGCCAGAACTTATTCCAGAAAGATATCTTCACCGCAATTGGATGGATTCCTCCGGCAGCCACCATGAATGCAGTTGAAGAAGTCTTCAGAATAGCAAGAGCTCAAACATTGATAGCCCTGTGCAGCACTGTGCCTGGCTACTGGTTCACAGTGGCTTTCATTGACAGAATTGGAAGATTTACCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTTTAGCCATTCCATACCATCACTGGACTTTGAAGGACAATCAAATAGGCTTCATAGTCCTCTACTCACTGACGTTCTTCTTCGCCAACTTCGGACCGAACGCAACCACTTTCGTCGTCCCAGCTGAAATCTTTCCAGCACGATTCCGTTCTACTTGCCATGGGATATCAGCAGCATCTGGGAAGCTCGGAGCTATGGTGGGTGCATTTGGTTTTCTATATTTGGCTCAAAGCCCGGACAAGAACAGAACCGATGCAGGATATCCTCCAGGCATTGGAGTCAAGAACTCGCTTCTTTTTCTGGGTGGACTTAACTTGTTGGGAATGTTGTTTACTTTTCTGGTGCCTGAAGCCAAGGGAAAATCATTGGAAGAGATGTCCGGCGAGAACGAAGATGGAACCATTGAAGAACTTGGGAGGCAGACACTTAGCCATAGAACAGTTTCAGAGGCTTAA 1692 45.51 MGKESLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAPKPGSLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGVTLMLMVVCSIGSGLSFGHNSQSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAVFISMVFKAKFDAPAYAVDPVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETARYTALVAKDTAQAASDMSKVLHMDIEAETPEPAQCQGHARKWELESAQCQGHARKCDRDTQQLRNAYGLFSKEFLRCHGTHLLGTAITWFLFDIAFYSQNLFQKDIFTAIGWIPPAATMNAVEEVFRIARAQTLIALCSTVPGYWFTVAFIDRIGRFTIQLMGFFFMTVFMFALAIPYHHWTLKDNQIGFIVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQSPDKNRTDAGYPPGIGVKNSLLFLGGLNLLGMLFTFLVPEAKGKSLEEMSGENEDGTIEELGRQTLSHRTVSEA 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 552994 554685 + CmoCh19G000980.1 Cmo19g00098 403258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00098 563 CDD MFS_PhT 25 531 - -
Cmo19g00098 563 MobiDBLite consensus disorder prediction 536 563 - -
Cmo19g00098 563 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 547 - -
Cmo19g00098 563 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 532 IPR020846 GO:0022857
Cmo19g00098 563 MobiDBLite consensus disorder prediction 536 551 - -
Cmo19g00098 563 Gene3D MFS general substrate transporter like domains 300 554 IPR036259 -
Cmo19g00098 563 Gene3D MFS general substrate transporter like domains 20 265 IPR036259 -
Cmo19g00098 563 SUPERFAMILY MFS general substrate transporter 12 539 IPR036259 -
Cmo19g00098 563 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 547 - -
Cmo19g00098 563 TIGRFAM 2A0109: phosphate:H+ symporter 11 541 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cmo19g00098 563 Pfam Sugar (and other) transporter 26 539 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01793 Cmo19g00098 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g00098 Cmo-Chr19:552994 Cmo10g00655 Cmo-Chr10:3010383 2.81E-11 dispersed
Cmo19g00098 Cmo-Chr19:552994 Cmo19g00099 Cmo-Chr19:556665 0 tandem
Cmo14g01847 Cmo-Chr14:13968135 Cmo19g00098 Cmo-Chr19:552994 0 wgd
Cmo17g00165 Cmo-Chr17:963739 Cmo19g00098 Cmo-Chr19:552994 0 wgd
Cmo19g00098 Cmo-Chr19:552994 Cmo02g01793 Cmo-Chr2:10195085 0 wgd
Cmo19g00098 Cmo-Chr19:552994 Cmo06g01332 Cmo-Chr6:9921850 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00098 K08176 - qsu:111998651 892.878