Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00099 ATGGCAAAGGAACAATTACAAGTACTAAATGCATTAGATGTTGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTCTTCTGCATATCCCTTGTCACAAAATTACTTGGAAGAATCTACTATCATGTTGATGGTGCAAAAAAGCCTGGATCATTGCCTCCAAACGTTGCAGCTGCCGTTAACGGCGTAGCGTTCTGCGGAACGCTCGCCGGGCAACTATTCTTTGGCTGGTTGGGTGATAAAATGGGGCGAAAACGAGTCTATGGCTTAACTCTAATGCTGATGGTTGTTTGCTCCATAGGCTCTGGCCTCTCCTTTGGCCACAATTCACAATGTGTCATGACTACTCTATGCTTCTTTCGATTCTGGCTCGGTTTCGGCATTGGTGGCGATTACCCTCTTTCGGCAACGATCATGTCGGAATACTCGAATAAGAAGACTCGTGGTGCGTTCATTGCTGCGGTGTTTGCTATGCAGGGATTTGGAATTTTAGGTGGCGGGATATTCGCCATTATCGTGTCGTCGGCGTTTAAGTCGAAGTTTGATGCTCCATCTTATGCTGTTGATCCAGTTGCCTCTACTGTGCCACAAGCTGATTATGTTTGGAGGATTATACTAATGGTTGGTGCTCTTCCTGCTGCTCTTACTTACTACTGGAGGATGAAAATGCCCGAAACCGCACGCTACACCGCGCTTGTAGCGAAGGATACCGCTCAAGCTGCATCGGATATGTCGAAAGTTATGCAAATGGATATTGAGGGCGAAGGAGCAAAGGCTGCTGAGCCAACGCCAAGTGATAGTGTTAGTTCATATGGCTTGTTCTCCAAAGAGTTCTTTAGTCGCCATGGAACTCATTTACTTGGAACTACAAGCACTTGGTTTCTACTTGACATAGCCTTTTACAGCCAAAACTTGTTTCAAAAGGATATCTTTAGCGCCATTGGATGGATACCACCAGCAGCCACCATGAATGCACTTGAAGAGGTCTTTAGAATAGCAAGAGCTCAAACATTGATAGCCCTCTGCAGCACTGTCCCTGGCTATTGGTTCACAGTGGCTTTCATTGATAGAATTGGAAGATTTGCCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTTTAGCTATTCCATATCATCATTGGACGTTAAAGGACAATCGGATCGGGTTCGTTGTCCTCTACTCGTTAACGTTCTTCTTTGCTAACTTTGGACCGAATGCTACCACGTTCGTCGTCCCAGCTGAGATCTTCCCGGCACGATTCCGTTCGACTTGTCATGGTATATCATCAGCTGCAGGGAAGCTTGGAGCTATGGTGGGTGCGTTTGGTTTTCTATATTTGGCTCAAAACCAAGATAAGAACAAAACTGAGGCTGGATATCCTCCTGGGATTGGAGTTAAGAACTCGCTTTTGTTGTTGGGTGCACTTAACTTTTTGGGGATTTTGTTTACTTTTCTTGTGCCGGAAGCTAAGGGGAAATCGTTGGAAGAGATGTCGGGCGAGATCGAGGATGGTACCATTGGGGAATTGGGTGGCCAAACATCTAGTACGACACAGTCACGTGTTTGA 1620 45.43 MAKEQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGSLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGLTLMLMVVCSIGSGLSFGHNSQCVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIVSSAFKSKFDAPSYAVDPVASTVPQADYVWRIILMVGALPAALTYYWRMKMPETARYTALVAKDTAQAASDMSKVMQMDIEGEGAKAAEPTPSDSVSSYGLFSKEFFSRHGTHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNALEEVFRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAMVGAFGFLYLAQNQDKNKTEAGYPPGIGVKNSLLLLGALNFLGILFTFLVPEAKGKSLEEMSGEIEDGTIGELGGQTSSTTQSRV 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 556665 558284 + CmoCh19G000990.1 Cmo19g00099 403259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00099 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 509 IPR020846 GO:0022857
Cmo19g00099 539 Gene3D MFS general substrate transporter like domains 20 530 IPR036259 -
Cmo19g00099 539 Pfam Sugar (and other) transporter 26 516 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cmo19g00099 539 MobiDBLite consensus disorder prediction 520 539 - -
Cmo19g00099 539 CDD MFS_PhT 25 508 - -
Cmo19g00099 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 522 - -
Cmo19g00099 539 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 522 - -
Cmo19g00099 539 SUPERFAMILY MFS general substrate transporter 12 516 IPR036259 -
Cmo19g00099 539 TIGRFAM 2A0109: phosphate:H+ symporter 11 518 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01793 Cmo-Chr2:10195085 Cmo19g00099 Cmo-Chr19:556665 0 dispersed
Cmo14g01847 Cmo-Chr14:13968135 Cmo19g00099 Cmo-Chr19:556665 0 dispersed
Cmo17g00165 Cmo-Chr17:963739 Cmo19g00099 Cmo-Chr19:556665 0 dispersed
Cmo19g00099 Cmo-Chr19:556665 Cmo07g00253 Cmo-Chr7:1240794 1.20E-11 dispersed
Cmo19g00098 Cmo-Chr19:552994 Cmo19g00099 Cmo-Chr19:556665 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00099 K08176 - qsu:111998651 906.746