Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00144 ATGGTGCATTATCTTCTCAAGAACGAAGAGAGTGACACTAAAATCGATCACAATCAAATAATACATTTAATTCTCGTATTGTTCGTAGCCGGCGCAGATACAACTGCAGCGACATTGCAATGGGCAATGGTGGAGCTATTGAGGAATCCAGAAAAATTAGCGAAAGCTCAAGTGGAAATTAGGCAAGTTTTGGGGAAGAACGAACCAGTGGAGGAGGCAGACATTTCGAGGCTGCCATATCTCCAAGCAGTAGTGAAGGAAGCTTTACGATTGCATCCAGCGGCTCCATTGTTACTACCTTGTAAGGTGAAACAAGAAGTGGAGATTGCAGGTTTCACAATCCCTAGAGATGCTCAGGTTCTGATTAATGCATGGGCGATCGGAAGAGATCCAATGATCTGGATGAATCCTGAATCCTTCGAACCAGAGAGGTTTATGGGATCAGAAATTGACGTCAGAGGGTGGAGCTTCGAGATGATTCCGTTCGGCGGAGGGAGAAGGATTTGCCCTGGATTGCCATTGGCTATGAGAATGATGCATTTGATGTTGGGTTCGTTAATTAGTTTCTTCGATTGGAAGGTTGAAGATGGATTTGAGATGAACATGAACGATAAATTTGGCATCGTCATAGAGATTGCTCATCCACTCGGAGCCATCCCATCGATAATTGTTTAG 675 44.15 MVHYLLKNEESDTKIDHNQIIHLILVLFVAGADTTAATLQWAMVELLRNPEKLAKAQVEIRQVLGKNEPVEEADISRLPYLQAVVKEALRLHPAAPLLLPCKVKQEVEIAGFTIPRDAQVLINAWAIGRDPMIWMNPESFEPERFMGSEIDVRGWSFEMIPFGGGRRICPGLPLAMRMMHLMLGSLISFFDWKVEDGFEMNMNDKFGIVIEIAHPLGAIPSIIV 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 802498 803290 + CmoCh19G001440.1 Cmo19g00144 403304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00144 224 Gene3D Cytochrome P450 1 215 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PRINTS E-class P450 group I signature 19 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PRINTS E-class P450 group I signature 82 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PRINTS E-class P450 group I signature 123 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PRINTS E-class P450 group I signature 169 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PRINTS E-class P450 group I signature 159 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PRINTS E-class P450 group I signature 39 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 SUPERFAMILY Cytochrome P450 3 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 Pfam Cytochrome P450 4 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 162 171 IPR017972 GO:0005506|GO:0016705
Cmo19g00144 224 PRINTS P450 superfamily signature 30 47 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PRINTS P450 superfamily signature 169 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PRINTS P450 superfamily signature 83 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PRINTS P450 superfamily signature 160 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00144 224 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 221 - -
Cmo19g00144 224 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 221 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g00144 Cmo-Chr19:802498 Cmo19g00147 Cmo-Chr19:811236 3.39E-135 dispersed
Cmo19g00144 Cmo-Chr19:802498 Cmo19g00145 Cmo-Chr19:804103 8.23E-137 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00144 - - cmos:111463980 363.999