Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00148 ATGCGTTTCTCGATTATGCGCTTTCTTCTGGTTCTTCATGCGGTTGATTTGCTTTTCTCTTGCTCAGGACAATCTTCACCACACATATACTTATCTCCTTCCTTGCAGCCATACCTGCAAACAACGACCACAGAAATTCCAACAGAGCATGCAAGGTTGGAGTCGATGAGTTTTTCATTTAAGCCTTCAAAGTTACATGCTAACTGGATCTTTAAGTCATCTTTGGGACCATCCACTGCTCCTGCACCTTCTCCAGGTCCTAGGAGTGCACCCTTACCTATTCGACATCATCGGCGGCGGCGGCGGCGTATACGGCCTCATGTGATTGCTCCTACACCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAACCCCTTACTGCGGCTCCCTTTGGTTCACCTTGTGGCTGCGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTCTTTCCTGTGATGAACGACCTTGAAAGTGAGATTGCAGCGGGGACTTACTTGGAGCAGAGCCAAGTGAAAATCATGGGTGCTAAAGCAGACAGTCAAAATCAAGGAAGAACTATGGTGGATATAAATTTAGTACCTCTAGGAGAGAAATTCGATAATACCACTGCAGTACTGACTTACAGAAGGTTTTGGGATAAAAAAGTGCGTCTAAATATGACGCTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCAGGGATTCCTTCTTCACCACCATATGGAGGGTACATGGGAAGTGCTCCTAGTGGAGGTGCTGGTGATCTTCCCATTACTGCAAATTTCGTTAATAAGAGCCAGAAGATGAGCATCAAAACAATTGGTATCATATCACTTTCAGCATTTGTTGTGTTATTAGTATTCATTGGAGCTCTTTCCATCTTTTTTAAATGGAGAAAAGTTGGCAGACCGTCTAGTGCTGTTGGCCCTGTCTTCACATCATCAATTAACAAAAGATCTGGTCTAGGATCGGGTTTATCAACTAGCATTGCTAGCTCCACCTCTGTTTCCCTAATTTCCACAATGCCAACCAGTATTCAATCTGTTAGAACATTTGGACTTTCTGAACTTGAGAAAGCAACAAACAAGTTTAGTTCGAAAAGGATTTTAGGTGAAGGGGGATTTGGCCGAGTTTACTGTGGTATTTTGCAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACACGGGATAATCAGAATAGAGACCGTGAATTTATTGCAGAAGTTGAGATGTTGAGTAGACTGCATCATCGGAATCTTGTGAAACTGATTGGTATATGCATGGAAGGCCGAACTCGCTGCTTGGTTTATGAGCTTATCCATAATGGCAGTGTTGAGTCTCACTTGCACGGCATTGATAAGAGAAAAGGACCTCTTGACTGGGATGCACGATTAAAGATTGCTCTTGGAGCTGCAAGAGGTTTGGCATATCTTCACGAAGATTCGAACCCCCGTGTAATTCACCGTGATTTCAAGGCAAGTAACGTTCTGTTGGAAGTAGATTTCACCCCCAAGGTTTCAGATTTTGGGTTGGCTAGGGAAGCAACTGAAGGAAGTGAACATATCTCAACACGCGTGATGGGAACTTTCGGGTACGTCGCCCCTGAATATGCAATGACAGGACACCTGCTCGTCAAAAGCGATGTTTACAGTTATGGAGTTGTGCTACTTGAGCTTCTTTCGGGTAGAAAACCGGTGGACATGTCCCAACCACATGGTGAGGAGAACCTCGTAACATGGGCTCGACCTCTATTGACCAGTAGAGAAGGTTTGGAGCAACTAGTAGATCCTTCTCTAGCTGGTAGTTACGACTTCGACGACATGGCCAAGGTGGCTGCCATTGCTTCTATGTGCGTTCATCCAGAAGTGACCCAAAGGCCATTTATGGGGGAAGTTGTGCAGGCTCTAAAGCTGATATACAACGATACAGACGAGACGTGTGCAGACTACTGCAGTCAAAAGGAGTCATCTGCTCGGGACTCCGATTTCAAAGGCGACATTGTTCCATCAGACAGCAGTTGGTGGAATGCTGGTGGCCTTACACCACGACTGACTTTCGGTCAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCCCTTGAAGAGATGGAAAACCGACCGTTTTCAACTTCAAGTTTCGTTGGCGACGAGATATCTTTGCCTATTCGGCACGGAAACAGGTCAGGTCCGTTACAAACCACACGAAGCAAGCCAGCATTCTACAGATTTTCGGGAAGTAGGAGCGAGCACGGAGGATTTCTTTCAAGGCCTTCTTGGAACAATAGGTTTTGGGTTTGA 2325 45.16 MRFSIMRFLLVLHAVDLLFSCSGQSSPHIYLSPSLQPYLQTTTTEIPTEHARLESMSFSFKPSKLHANWIFKSSLGPSTAPAPSPGPRSAPLPIRHHRRRRRRIRPHVIAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNDLESEIAAGTYLEQSQVKIMGAKADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVRLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGGAGDLPITANFVNKSQKMSIKTIGIISLSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTSSINKRSGLGSGLSTSIASSTSVSLISTMPTSIQSVRTFGLSELEKATNKFSSKRILGEGGFGRVYCGILQDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICMEGRTRCLVYELIHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSARDSDFKGDIVPSDSSWWNAGGLTPRLTFGQASSFITMEYSSGPLEEMENRPFSTSSFVGDEISLPIRHGNRSGPLQTTRSKPAFYRFSGSRSEHGGFLSRPSWNNRFWV 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 815151 822069 + CmoCh19G001480.1 Cmo19g00148 403308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00148 774 CDD STKc_IRAK 377 646 - -
Cmo19g00148 774 PANTHER OS01G0750732 PROTEIN 38 771 - -
Cmo19g00148 774 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Cmo19g00148 774 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 38 771 - -
Cmo19g00148 774 Gene3D Phosphorylase Kinase; domain 1 343 446 - -
Cmo19g00148 774 Pfam Protein tyrosine and serine/threonine kinase 374 642 IPR001245 GO:0004672|GO:0006468
Cmo19g00148 774 MobiDBLite consensus disorder prediction 77 105 - -
Cmo19g00148 774 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Cmo19g00148 774 ProSiteProfiles Protein kinase domain profile. 371 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g00148 774 Gene3D Transferase(Phosphotransferase) domain 1 447 670 - -
Cmo19g00148 774 SUPERFAMILY Protein kinase-like (PK-like) 349 646 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01752 Cmo19g00148 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00292 Cmo-Chr1:1389479 Cmo19g00148 Cmo-Chr19:815151 2.94E-130 dispersed
Cmo08g00740 Cmo-Chr8:4690171 Cmo19g00148 Cmo-Chr19:815151 0 dispersed
Cmo10g00745 Cmo-Chr10:3433113 Cmo19g00148 Cmo-Chr19:815151 0 dispersed
Cmo11g00708 Cmo-Chr11:3418297 Cmo19g00148 Cmo-Chr19:815151 0 dispersed
Cmo14g00961 Cmo-Chr14:5121609 Cmo19g00148 Cmo-Chr19:815151 2.46E-132 dispersed
Cmo17g00697 Cmo-Chr17:7083257 Cmo19g00148 Cmo-Chr19:815151 0 dispersed
Cmo19g00148 Cmo-Chr19:815151 Cmo17g01367 Cmo-Chr17:10614486 1.26E-104 dispersed
Cmo19g00148 Cmo-Chr19:815151 Cmo02g01752 Cmo-Chr2:10027464 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75095 PF07714 PK_Tyr_Ser-Thr 1.80E-46 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00148 - - csv:101203278 1342.41