Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00182 ATGTTGTGCTTGGTATATGATGTGACAAAATTCCTCGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAAGCACTGGTAAGGATGCAACCAATGATTTTCTCGACATCGGGCACAGCAGCGCTGCTAGTGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCGGTTATTCCTGCAAAAGGAGAGTACATTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACTGGAATTCATTATCAAGGTACTCCAGTTTCTAGCTCCCCTGGTAATTCTGGGTTTGGCTTTTGGCATCCACATCTATACCAAAACGACTTAA 330 44.24 MLCLVYDVTKFLEDHPGGDEVLLSSTGKDATNDFLDIGHSSAASAMMEEFYVGDIDSSVIPAKGEYIPPKQPLYNQDKTLEFIIKVLQFLAPLVILGLAFGIHIYTKTT 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1180756 1181229 - CmoCh19G001820.1 Cmo19g00182 403342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00182 109 Pfam Cytochrome b5-like Heme/Steroid binding domain 5 55 IPR001199 -
Cmo19g00182 109 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 56 IPR001199 -
Cmo19g00182 109 Gene3D - 3 58 IPR036400 -
Cmo19g00182 109 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 11 18 IPR018506 GO:0020037
Cmo19g00182 109 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 60 IPR036400 -
Cmo19g00182 109 SMART Cyt_b5_2 1 56 IPR001199 -
Cmo19g00182 109 PRINTS Cytochrome B5 signature 15 29 IPR001199 -
Cmo19g00182 109 PRINTS Cytochrome B5 signature 30 37 IPR001199 -
Cmo19g00182 109 PRINTS Cytochrome B5 signature 43 55 IPR001199 -
Cmo19g00182 109 PRINTS Cytochrome B5 signature 5 15 IPR001199 -
Cmo19g00182 109 PANTHER - 5 107 - -
Cmo19g00182 109 PANTHER CYTOCHROME B5 5 107 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g00182 Cmo-Chr19:1180756 Cmo05g00477 Cmo-Chr5:2225434 2.78E-19 dispersed
Cmo14g01941 Cmo-Chr14:14367871 Cmo19g00182 Cmo-Chr19:1180756 7.62E-52 wgd
Cmo17g00112 Cmo-Chr17:595825 Cmo19g00182 Cmo-Chr19:1180756 1.96E-47 wgd
Cmo19g00182 Cmo-Chr19:1180756 Cmo02g01726 Cmo-Chr2:9856432 1.56E-64 wgd
Cmo19g00182 Cmo-Chr19:1180756 Cmo06g01256 Cmo-Chr6:9487661 2.00E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00182 K23490 - csv:101212882 190.274