Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00201 ATGTTTGATTCCTTCTTCTTCTTCTTCTTGTTGTTGTTGTTGATTGTATTCCCTCACTGTAAATCTTCTGAAATTTCCGCCGGTGGTCGGAGATTGCTTCACCAGCCATTTTTTCCGATTGATTCAGCTCCTCCGGCGGAGCAGCCATCGCCTCCGGTACCGCCACCGCCGAATCCCAAATACCCATTTTCCACTACCCCTCCTGCAACACCTGATGGGTCACCATTCTTTCCGACGTATCCTGCAACTCCACCTCCTCCAGCGCCGGCGAATTTAGCCTCGTTTCCGGCTAATATATCTTCTCTGAATCTACCTCATTCGTCTGGTTACAGTTCCAAGAAGGTTGTTCCGTTGGTTATTGCTGGGGTTGTTTCCGCCGTCTTGGTAATCTGCATTGTAGGGTTTTTGTTCTGGCGGCGGCGGCGGCGGGGTGGTCGTGGATTGGGCGATGGAAAGACGTATAGATCGGAGGATAGTAGCCGGTTGTCTCTGGTTCAGAATGTTGAAGTCGGTAATGGAATCCCTAAGTTGAGAAATCCGTCGGCTACTAGCTCTGAGTTTCTGTATTTAGGTACTCTTGTAAGCACGAGAGGGATCGACGAACGTTCCGTTGGCGGAGCTCGTGTTGTTGGTTCTAGGCCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGCTGAATCTAGGTCGGACGAATGAGAAGAAAAATCGCGAAAATGGAGAGGAGAAATCGATTGGAGATGAAGAGGAAGAGGAATTTTACTCTCCGAAAGGTTCTCTTGGCGCGATTGGATCGGGATCTCGACGAGTTCTCGCAACAATGGCGGCGGAAGATTTGCTTGGCAAAACCAGCGATTCGAGCTCGACTTCGTGTTCTACATCTAGCGGTTCCATTTCGCCGGCGAGGTCATGTTCTAAGAGTCTCTCTCTATCTCCACCGGCGAGTATGAGCCCTAGGAGATCCGTTCAACATGCGGAGCAGGTTGCCCACGGCGGAGGCGAATCAGACGGCGGCGTTAAATCTCATTGTCCATCTCCAATGCGTTTAGCGACGGAGAAGAACTCCACCGCATCTTCTTCCCGGAGATTTTCAAATGCTTCAATTCTCAGTGCGATTTTCCCGAATTTATCAACCGATAAGGATTTAGTTCATCGGAATTCGGATCCAGGCGAGCAGTTTCCTTCTTCTCCTTGTTTATTTCCTCTTTCAGATGGAATTTTAGGGCAAATTCAGATTCAACCGCCGATAGTTTCAAACGTTCCTGATTCGGATTCCGATGCAAAACTTAAGCAATTTCCTTACTCATTTACTTCATCTTCACCTTCATCGTCACCGGAACGAGTAGTTTTGGACTCTTCTCCGTCAAGAACCTCCATTATTTCCGATCAAACCAGGTCTTCTCCACCATCACCAGAGAGAATTCTCAACCATTTTGATCAAGATGTGAAATCTTCTTCTAATGTGGCTCCTCCACCACCTCCACCACCTCCACCACTTCCACCACCGCCTCCGCCACCACCAGCACCACTGGTAGCACTACCAGGACGCAGAGAAAAGCCGATTTCTCCTAAAACACCAATGGATCAATCCATTACAAAGGCGGCTCCTCCATTAAAGCCATTTCAAATGAAGAATCTGAAAAATGTATCACCAATTCAGCTGCCATCTTGCAAAAGCAATGGTGAATCATCTGAAGATACCCCCAAGCCCAAATTGAAGCCATTGCATTGGGATAAAGTAAGGGCTAGCTCTGATCGTGAGATGGTGTGGGATCAACTCAGATCAAGCTCTTTTAAAGTGAATGAGGAAATGATTGAAACTCTGTTTGTTGTGAACACTTCCAACTCGAAGGAGACAACTCCACGTCCAGTGTTTCCGACACCTAACCAAGAGATCGGAGTTCTCGATCCGAAGAAGTCGCAGAACATTGCGATTGCGTTACGAGCGCTTAATGTGACGATAGAAGAAGTTTGTGATGCCCTTTTAGAAGGAAATCTACAAGTTTCTCCGATCTTCTTTAGTAAAAGAACATTTCTTTTCGGAGTATCCGACGTTTACATTCACGAGCTATGTTGTCAAGTCGATAAACATCTCTATTCTGTCGAATCCCGATCGAAAAGTGAGTATAAAAGCTTGAATGATATGAATGTAGGTAATGCAGAAGCACTTGGAATAGAGCTACTTGAAAGCTTATTGAAAATGGCTCCAACAAAAGAAGAAGAACGCAAGCTAAAGGCATCGAAGGATGTCTCACCTACAAAATTTGGCCCAGCTGAGAAGTTTTTGAAGGCAATCCTTGATGTTCCTTTTGCATTCAAAAGGGTGGATGCAATGCTTTACATGGCAAATTTCGAGTCCGAGATCGAGTACCTAAAGAAGTCATTCGAAAATCTCGAGACTGCTTGTGAAGAATTGAGGAACAGCAGGATGTTCTTGAAACTTTTAGAAGCTGTACTCAAGACAGGGAATCGTATGAACGTTGGCACGAACCGTGGCGATGCCCACGCGTTCAAACTCGACACGCTTTTAAAACTTGTTGATGTCAAGGGTGCAGATGGAAAAACCACTCTTCTACATTTCGTCGTACAAGAAATCATAAGAAGCGAAGGCGCTCGTCTTTGTAACACGAGTTCTCTAAACTCGAACCCGAATGACGATATCAAATGCAGGAAACTCGGTCTGCAAGTTGTTTCGAGTCTTAGCTCAGAGCTCACCAACGTAAAGAAGGCTGCCTCAATGGATTCCGACGTGCTCAATGGCGAGGTCGTTAAGCTTTCGAGAGGACTCAACAACATTAGGGAGGCTCTACGTCTCAACGAAGCAGATGGACGAAACGATAGCACGGAAAAGTTCTCGTACTCGATGAGTAGATTCTTGAAAATGGCAGAAGAGGAACTGATTAGAATCCAAGCTCAGGAAAGTGTTGCATTATCTCTAGTAAAGGAGATCACTGAGTACTTCCATGGCAACTCTGCCAAGGAAGAAGCTCATCCATTTAGGATTTTCATGGTGGTTCGAGATTTCCTAACGGTTCTGGACGGAGTTTGCAAAGAAGTCGGGACGATAAACGAGCGGACGATCGTGAGTTCGGCTCATAAATTCCCGGTTCCGGTGAATCCGACATTACCACAAGCATTTCAAGCTCATCATAGAGTGCAGAAATACAGTTCTTCTGATGAAGAATGA 3186 46.26 MFDSFFFFFLLLLLIVFPHCKSSEISAGGRRLLHQPFFPIDSAPPAEQPSPPVPPPPNPKYPFSTTPPATPDGSPFFPTYPATPPPPAPANLASFPANISSLNLPHSSGYSSKKVVPLVIAGVVSAVLVICIVGFLFWRRRRRGGRGLGDGKTYRSEDSSRLSLVQNVEVGNGIPKLRNPSATSSEFLYLGTLVSTRGIDERSVGGARVVGSRPLDSPELHPLPPLNLGRTNEKKNRENGEEKSIGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEDLLGKTSDSSSTSCSTSSGSISPARSCSKSLSLSPPASMSPRRSVQHAEQVAHGGGESDGGVKSHCPSPMRLATEKNSTASSSRRFSNASILSAIFPNLSTDKDLVHRNSDPGEQFPSSPCLFPLSDGILGQIQIQPPIVSNVPDSDSDAKLKQFPYSFTSSSPSSSPERVVLDSSPSRTSIISDQTRSSPPSPERILNHFDQDVKSSSNVAPPPPPPPPPLPPPPPPPPAPLVALPGRREKPISPKTPMDQSITKAAPPLKPFQMKNLKNVSPIQLPSCKSNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNSKETTPRPVFPTPNQEIGVLDPKKSQNIAIALRALNVTIEEVCDALLEGNLQVSPIFFSKRTFLFGVSDVYIHELCCQVDKHLYSVESRSKSEYKSLNDMNVGNAEALGIELLESLLKMAPTKEEERKLKASKDVSPTKFGPAEKFLKAILDVPFAFKRVDAMLYMANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCNTSSLNSNPNDDIKCRKLGLQVVSSLSSELTNVKKAASMDSDVLNGEVVKLSRGLNNIREALRLNEADGRNDSTEKFSYSMSRFLKMAEEELIRIQAQESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTVLDGVCKEVGTINERTIVSSAHKFPVPVNPTLPQAFQAHHRVQKYSSSDEE 1061
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1313077 1318079 - CmoCh19G002010.1 Cmo19g00201 403361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00201 1061 PANTHER FORMIN-RELATED 718 1061 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cmo19g00201 1061 MobiDBLite consensus disorder prediction 435 533 - -
Cmo19g00201 1061 Pfam Formin Homology 2 Domain 564 1012 IPR015425 -
Cmo19g00201 1061 MobiDBLite consensus disorder prediction 210 261 - -
Cmo19g00201 1061 MobiDBLite consensus disorder prediction 281 361 - -
Cmo19g00201 1061 ProSiteProfiles Formin homology-2 (FH2) domain profile. 562 1038 IPR015425 -
Cmo19g00201 1061 MobiDBLite consensus disorder prediction 44 68 - -
Cmo19g00201 1061 SMART it6_source 562 1027 IPR015425 -
Cmo19g00201 1061 PANTHER FORMIN-RELATED 7 665 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cmo19g00201 1061 MobiDBLite consensus disorder prediction 551 573 - -
Cmo19g00201 1061 SUPERFAMILY Formin homology 2 domain (FH2 domain) 575 1025 - -
Cmo19g00201 1061 PANTHER FORMIN-LIKE PROTEIN 1 718 1061 - -
Cmo19g00201 1061 MobiDBLite consensus disorder prediction 281 322 - -
Cmo19g00201 1061 PANTHER FORMIN-LIKE PROTEIN 1 7 665 - -
Cmo19g00201 1061 MobiDBLite consensus disorder prediction 487 513 - -
Cmo19g00201 1061 Gene3D Formin, FH2 domain 560 1022 IPR042201 -
Cmo19g00201 1061 Coils Coil 781 808 - -
Cmo19g00201 1061 MobiDBLite consensus disorder prediction 435 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01984 Cmo-Chr4:10269132 Cmo19g00201 Cmo-Chr19:1313077 1.64E-16 dispersed
Cmo10g01196 Cmo-Chr10:11686100 Cmo19g00201 Cmo-Chr19:1313077 2.47E-102 dispersed
Cmo11g01174 Cmo-Chr11:6781255 Cmo19g00201 Cmo-Chr19:1313077 2.02E-106 dispersed
Cmo19g00201 Cmo-Chr19:1313077 Cmo05g00906 Cmo-Chr5:6956646 1.73E-62 dispersed
Cmo19g00201 Cmo-Chr19:1313077 Cmo02g01705 Cmo-Chr2:9770535 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00201 - - cmos:111464076 1673.29