Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00283 ATGGCGAAAGTTTGTTTCATTTTGGTTGTAACTACGGTGGTGGTGGTGCTTGGCTTTGCTGCCTCGACCGTGCACGGTCAAGGCACACGGCTCGGGTTCTACCGTGCCAAGTGCCCGAATGCTGAATCCATCGTTAGATCCACTGTCCAATCCCATTTCATGAAGGATCCCACTATCGCTCCTGGGTTATTGAGAATGCACTCTCATGACTGTTTTGTTCGAGGGTGTGATGCTTCTGTGCTTCTTGATGGTCCCGATTCCGAGAGGACGGCTGTGCCTAACCTTACTTTGAAAGGGTTTGAGGTCATTGACGATGCCAAGTCGCAGCTTGAAGATGCTTGCCCTGGTGTCGTGTCATGTGCTGATATTCTTGCTCTTGCTGCTCGTGACTCCGTTGTTCTGACGGGTGGATTAAGATGGGAAGTTCCGACCGGACGACGAGATGGCAGAATTTCATTGGTTTCAGAAGTGAACTTGCCAAGTTTTTCAGATTCCATTGAAGTTCAAAAAGAGAAATTTAGGGTAGTGGGTCTCGACACTCATGACCTCGTCACTCTCGCAGGATCTCATACGATCGGAACGGCGTCATGTCGTTTTTTCAGTTACAGACTCTACAACTTCACGACCGCCACCAAAAGTGGCGCCGATCCAACCATTAACCCATCGCTTGTCGGTCGGCTACGAGAACTTTGCCCTGAAGACGGAGATGGCTCGAACCGAGTCGAGCTTGACATTGGTAGTCCCGAAAAGTTCGACCTATCGTTCTACTCAAACTTGAGGCGTGGGGGCGGGATATTAGAGTCCGATCAAAAGCTGTGGAACGATGACTCAACTCGGCCGACCGTCCGACACTACTTGGGTTCGAGGATTCTAAGGGGACGTTCTAGCTTTAGAGTTGAGTTTGGGAAATCAATGGTGAAAATGAGCAACATTGACGTTAAAACTGGCATTGAGGGTGAAATCAGAAGGGTTTGCTCCGAGGTTAATTGA 990 49.39 MAKVCFILVVTTVVVVLGFAASTVHGQGTRLGFYRAKCPNAESIVRSTVQSHFMKDPTIAPGLLRMHSHDCFVRGCDASVLLDGPDSERTAVPNLTLKGFEVIDDAKSQLEDACPGVVSCADILALAARDSVVLTGGLRWEVPTGRRDGRISLVSEVNLPSFSDSIEVQKEKFRVVGLDTHDLVTLAGSHTIGTASCRFFSYRLYNFTTATKSGADPTINPSLVGRLRELCPEDGDGSNRVELDIGSPEKFDLSFYSNLRRGGGILESDQKLWNDDSTRPTVRHYLGSRILRGRSSFRVEFGKSMVKMSNIDVKTGIEGEIRRVCSEVN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2069532 2071071 + CmoCh19G002830.1 Cmo19g00283 403443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00283 329 PANTHER PEROXIDASE 8 327 - -
Cmo19g00283 329 SUPERFAMILY Heme-dependent peroxidases 30 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 CDD secretory_peroxidase 30 328 IPR033905 GO:0004601|GO:0042744
Cmo19g00283 329 Gene3D - 32 329 - -
Cmo19g00283 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cmo19g00283 329 PANTHER PEROXIDASE 25-RELATED 8 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 Gene3D Peroxidase, domain 2 160 308 - -
Cmo19g00283 329 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00283 329 ProSiteProfiles Plant heme peroxidase family profile. 28 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g00283 Cmo-Chr19:2069532 Cmo19g00285 Cmo-Chr19:2076516 6.58E-153 dispersed
Cmo19g00283 Cmo-Chr19:2069532 Cmo19g00284 Cmo-Chr19:2073616 1.83E-147 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00283 K00430 - csv:101202985 528.094