Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00284 ATGGGGAAACGAATTCATTTCATCCCAATTCTTGTTTTAATTGCTTTCGTGTCGTTGGTTGGCTCGATGGCTGCAACCCTAGTTCCAAGCCGAGGTACGCATGTCGGGTTCTACTCGACGACATGCCCACAAGTCGAGGCTATTGTTAGAGCAACTGTGAAGTCTCATTTTCAATTAGATCCAACGGTGGCTCCTGGGTTATTGAGAATGCACTTCCACGACTGCTTTGTACGAGGATGTGATGCTTCTGTGCTCCTTGTCGGTCCGAGAACCGAGAGAGCAGCACCGCCCAACCTCTCTTTAAATGGGTTTGAGGTTATTAACGATGCTAAATCTCGCCTCGAACGTGCTTGTCCTGGTGTTGTCTCTTGTGCTGATATTCTTGCCCTAGCTGCTCGTGACTCGGTGGTTTTGACAAAAGGAGTGAGTTGGGGAGTGCCGACAGGACGTAGAGATGGAAGGGTTTCGTTGGCTTTGGAGGCTAACAATGCTCTACCTAAGGTCAATGATACCATTCAAACTCAAAGGAAGTTATTTAAGAGCAAAGGTCTCAATATTCAAGATCTTGTCACTCTAGTTGGTGCACATACGATTGGAACCACCGCATGTAGCGTTTTCAAATATAGGCTCTACAATTTCAGCACCACAAGGAATGGTGCAGATCCAGCCATGAACCCATCCTTTGTTCATCAGCTACGAACACTTTGCCCCAAAAATGGAGAAGGCTCACCCAATATTGGACTCGACATAAGCACTCCCAACCAATTTGACACATCTTTCTTCTCAAACTTGAGGAATGGGCGTGGGGTCTTGGAGTCTGATCAGAAGCTGTGGAACGATCCCTCGACTCGGGCTTTCGTTCGACGTTTCTTGCTCAAAGGTTCGTTGGGTTTGAACTTCGACCTCGAGTTTGGGAAATCTATGGTTAAGATGAGCAACATTGGAGTCAAGACGGGAACTCGAGGTGAAATTCGGAAGATTTGCACTATGGTTAACTAG 999 46.85 MGKRIHFIPILVLIAFVSLVGSMAATLVPSRGTHVGFYSTTCPQVEAIVRATVKSHFQLDPTVAPGLLRMHFHDCFVRGCDASVLLVGPRTERAAPPNLSLNGFEVINDAKSRLERACPGVVSCADILALAARDSVVLTKGVSWGVPTGRRDGRVSLALEANNALPKVNDTIQTQRKLFKSKGLNIQDLVTLVGAHTIGTTACSVFKYRLYNFSTTRNGADPAMNPSFVHQLRTLCPKNGEGSPNIGLDISTPNQFDTSFFSNLRNGRGVLESDQKLWNDPSTRAFVRRFLLKGSLGLNFDLEFGKSMVKMSNIGVKTGTRGEIRKICTMVN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2073616 2075200 + CmoCh19G002840.1 Cmo19g00284 403444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00284 332 PANTHER PEROXIDASE 25-RELATED 12 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 SUPERFAMILY Heme-dependent peroxidases 34 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PANTHER PEROXIDASE 12 330 - -
Cmo19g00284 332 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Cmo19g00284 332 Gene3D - 36 332 - -
Cmo19g00284 332 ProSiteProfiles Plant heme peroxidase family profile. 32 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 Gene3D Peroxidase, domain 2 166 311 - -
Cmo19g00284 332 Pfam Peroxidase 49 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 CDD secretory_peroxidase 34 331 IPR033905 GO:0004601|GO:0042744
Cmo19g00284 332 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00284 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00590 Cmo-Chr10:2674994 Cmo19g00284 Cmo-Chr19:2073616 5.11E-125 dispersed
Cmo17g00980 Cmo-Chr17:8520503 Cmo19g00284 Cmo-Chr19:2073616 5.98E-87 dispersed
Cmo19g00284 Cmo-Chr19:2073616 Cmo19g00303 Cmo-Chr19:2222318 3.23E-92 dispersed
Cmo19g00283 Cmo-Chr19:2069532 Cmo19g00284 Cmo-Chr19:2073616 1.83E-147 tandem
Cmo19g00284 Cmo-Chr19:2073616 Cmo19g00285 Cmo-Chr19:2076516 5.99E-153 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00284 K00430 - tcc:18608323 446.817