Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00285 ATGGCGAAATCGGGTTATAGTCCAATGCTCGTTCTCGCTATCTCGATAGCGGTGGTGCTACTCACCTTCACGACCCCGGTCGTGCATGGCCAAGGCACTCGCTTAGGTTTCTACTCCAACTCTTGCCCTCAAGCCGAGTCCATCGTTGCATCTACCGTTCGATCTCATTTCCAATCCGATCCATCGATCGCACCTGGGTTGTTGAGAATGCACTTCCATGATTGCTTTGTTCGAGGTTGTGATGCCTCTGTACTCCTAGCTGGATCCAATAGCGAGAGGACTTCACCTCCGAACCTTTCGTTAAAAGGGTTTGAGGTGATTGACGATGCCAAGACGCAGCTTGAAGCTGCTTGTCCTGGTGTTGTATCTTGTGCCGATATTCTTGCGCTTGCGGCTCGTGACTCGGTGGTTATGGTAGGACCCATGTATCTGATTTTGATAATGATTGGTTTGCATGCATGTGTGGGTGAGACAAGTGGATTGCGTTGGGGTGTGCCCACAGGACGAAGGGATGGCACGGTTTCAGTGGCTTCAGAAGCTAACGATTTACCTGGATTTACTGACTCCATTGATGTTCAAAAGAAGAAATTCAGCGATAAGGGTCTCAACACTCAAGATCTTGTTACTCTCGTGGGTGGACACACCATTGGCACCACACAATGCCAGTTTTTCAGCTACAGGCTCTTCAACTTCACTTCAAATGGTCCAGATTCAAGCATCGACCCAGCATTCGTGAGCCAATTGCAAGCCCTTTGCCCACAGAACGGCGACGGCAGCCGCAGGGTTGGGTTGGACAATGGCAGCCCCAACAGGTTCGACACATCCTTCTTCTCAAACTTAAGGAATGGACGTGGGATCTTGGAGTCCGATCAAAAGCTATGGACCGATGCCTCCACTCGCACTTTTGTGCAACGCTTTCTGGGTTTGAGAGGGCTGTTGGGTTTGACCTTCAACGCTGAGTTTGGGAAATCCATGGTTAAGATGGGTAATATTGAAGTTAAAACTGGTACTCAGGGAGAGATTCGTAAAGTTTGTTCTGTAGTTAACTAA 1050 49.05 MAKSGYSPMLVLAISIAVVLLTFTTPVVHGQGTRLGFYSNSCPQAESIVASTVRSHFQSDPSIAPGLLRMHFHDCFVRGCDASVLLAGSNSERTSPPNLSLKGFEVIDDAKTQLEAACPGVVSCADILALAARDSVVMVGPMYLILIMIGLHACVGETSGLRWGVPTGRRDGTVSVASEANDLPGFTDSIDVQKKKFSDKGLNTQDLVTLVGGHTIGTTQCQFFSYRLFNFTSNGPDSSIDPAFVSQLQALCPQNGDGSRRVGLDNGSPNRFDTSFFSNLRNGRGILESDQKLWTDASTRTFVQRFLGLRGLLGLTFNAEFGKSMVKMGNIEVKTGTQGEIRKVCSVVN 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2076516 2079018 - CmoCh19G002850.1 Cmo19g00285 403445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00285 349 PANTHER PEROXIDASE 153 347 - -
Cmo19g00285 349 Gene3D Peroxidase, domain 2 184 328 - -
Cmo19g00285 349 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Cmo19g00285 349 Gene3D - 36 349 - -
Cmo19g00285 349 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 Pfam Peroxidase 49 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Plant peroxidase signature 323 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PANTHER PEROXIDASE 25-RELATED 153 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PANTHER PEROXIDASE 25-RELATED 17 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 PANTHER PEROXIDASE 17 138 - -
Cmo19g00285 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
Cmo19g00285 349 ProSiteProfiles Plant heme peroxidase family profile. 32 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00285 349 CDD secretory_peroxidase 34 348 IPR033905 GO:0004601|GO:0042744
Cmo19g00285 349 SUPERFAMILY Heme-dependent peroxidases 34 349 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g00674 Cmo-Chr18:8586581 Cmo19g00285 Cmo-Chr19:2076516 4.26E-79 dispersed
Cmo19g00283 Cmo-Chr19:2069532 Cmo19g00285 Cmo-Chr19:2076516 6.58E-153 dispersed
Cmo19g00285 Cmo-Chr19:2076516 Cmo19g00303 Cmo-Chr19:2222318 6.83E-93 dispersed
Cmo19g00284 Cmo-Chr19:2073616 Cmo19g00285 Cmo-Chr19:2076516 5.99E-153 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00285 K00430 - csv:101217567 531.561