Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo19g00303 | ATGGCGAAGTGTGTGAATTTTCTCTATCTTTTTGTGTTCTTTGGTTGCTTTGCACCCTTTTCTCAAGCTCAGCTCAAATTTGGATTCTATGCTCAATCTTGTCCTTCTGCTGAGTCCATTGTTCGCTCTGTTGTAAGCGACGCTGTTCGGAACGATGGCAATATGGCTGCCGTGTTGCTCCGTCTCCATTTTCATGACTGCTTTGTCGAGGGTTGCGACGGTTCAATCTTGATCGACACGGCACCGAACCCGGAAAAGGGTGCTTTTGGGCATCAAGGGGTGGGGGGATTCGAGGTGATAGAGAGAGCCAAGGAAGAATTGGAAAGCCAATGCCCAGGAGTGGTTTCTTGTGCAGACATCGTGGCTATGGCAGCTAGAGACGCCATTGTTATGGCAAACGGACCGGAGTACGAGGTTCTTACTGGCCGGAGAGACGGCAGGGTATCGGATGTCTCGCTGGCGGATTCGCTGCCGGATGTGAGTGATTCAATTCAGGTTTTGAAGAACAAATTCGGTCAGAAAGGGATGACAGACAAGGACTTGGTTTTACTCAGTGCGGCACACACTATTGGAACCACGGCATGCTTCTTCATGACAAGGCGCCTCTACAACTTCTTCCCGGGTGGTGGATCAGATCCCGAAATAAATCCGATGATGTTGCCGGAGCTAAAGTCGCAATGCCCTCGAAATGGCAACGTCAACACCCGTCTCGGCATGGACCGTGGCAGCCCCCGCACGTTCGACATTCACATTCTTCAAAACATTAGAAATGGCTTCGCCGTCCTCGCCTCCGATGCTCGCCTAAACGACGACCCATCGACTCGAGCTGTTATGGACTCCTACTTCAGCCCTCTCGCCCCCATTCTCGGTCCCTCATTTCAGGACGATTTCGTCAACTCGATAGTGAGAATGGGCGAGATTGGGGCCAAAACTGGGTCTCAAGGAGAGATTCGAAGGGTATGTTCTGCTTTTAACTCAAGGTAA | 984 | 51.12 | MAKCVNFLYLFVFFGCFAPFSQAQLKFGFYAQSCPSAESIVRSVVSDAVRNDGNMAAVLLRLHFHDCFVEGCDGSILIDTAPNPEKGAFGHQGVGGFEVIERAKEELESQCPGVVSCADIVAMAARDAIVMANGPEYEVLTGRRDGRVSDVSLADSLPDVSDSIQVLKNKFGQKGMTDKDLVLLSAAHTIGTTACFFMTRRLYNFFPGGGSDPEINPMMLPELKSQCPRNGNVNTRLGMDRGSPRTFDIHILQNIRNGFAVLASDARLNDDPSTRAVMDSYFSPLAPILGPSFQDDFVNSIVRMGEIGAKTGSQGEIRRVCSAFNSR | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 2222318 | 2226896 | - | CmoCh19G003030.1 | Cmo19g00303 | 403463 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo19g00303 | 327 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 16 | - | - | |
Cmo19g00303 | 327 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Haem peroxidase superfamily signature | 115 | 132 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Haem peroxidase superfamily signature | 133 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Haem peroxidase superfamily signature | 180 | 195 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Haem peroxidase superfamily signature | 240 | 255 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 325 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 180 | 190 | IPR019793 | - | |
Cmo19g00303 | 327 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 325 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PANTHER | PEROXIDASE 25-RELATED | 13 | 323 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Cmo19g00303 | 327 | Gene3D | Peroxidase, domain 2 | 158 | 304 | - | - | |
Cmo19g00303 | 327 | CDD | secretory_peroxidase | 24 | 324 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo19g00303 | 327 | Pfam | Peroxidase | 41 | 281 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Plant peroxidase signature | 95 | 108 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Plant peroxidase signature | 114 | 124 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Plant peroxidase signature | 133 | 148 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Plant peroxidase signature | 179 | 191 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Plant peroxidase signature | 238 | 253 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Plant peroxidase signature | 254 | 271 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | PRINTS | Plant peroxidase signature | 299 | 312 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo19g00303 | 327 | Gene3D | - | 28 | 325 | - | - | |
Cmo19g00303 | 327 | PANTHER | PEROXIDASE | 13 | 323 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo19g00284 | Cmo-Chr19:2073616 | Cmo19g00303 | Cmo-Chr19:2222318 | 3.23E-92 | dispersed | |
Cmo19g00285 | Cmo-Chr19:2076516 | Cmo19g00303 | Cmo-Chr19:2222318 | 6.83E-93 | dispersed | |
Cmo19g00303 | Cmo-Chr19:2222318 | Cmo17g00980 | Cmo-Chr17:8520503 | 2.03E-73 | dispersed | |
Cmo19g00303 | Cmo-Chr19:2222318 | Cmo02g00159 | Cmo-Chr2:771614 | 1.23E-75 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo19g00303 | K00430 | - | csv:101221831 | 522.316 |