Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00303 ATGGCGAAGTGTGTGAATTTTCTCTATCTTTTTGTGTTCTTTGGTTGCTTTGCACCCTTTTCTCAAGCTCAGCTCAAATTTGGATTCTATGCTCAATCTTGTCCTTCTGCTGAGTCCATTGTTCGCTCTGTTGTAAGCGACGCTGTTCGGAACGATGGCAATATGGCTGCCGTGTTGCTCCGTCTCCATTTTCATGACTGCTTTGTCGAGGGTTGCGACGGTTCAATCTTGATCGACACGGCACCGAACCCGGAAAAGGGTGCTTTTGGGCATCAAGGGGTGGGGGGATTCGAGGTGATAGAGAGAGCCAAGGAAGAATTGGAAAGCCAATGCCCAGGAGTGGTTTCTTGTGCAGACATCGTGGCTATGGCAGCTAGAGACGCCATTGTTATGGCAAACGGACCGGAGTACGAGGTTCTTACTGGCCGGAGAGACGGCAGGGTATCGGATGTCTCGCTGGCGGATTCGCTGCCGGATGTGAGTGATTCAATTCAGGTTTTGAAGAACAAATTCGGTCAGAAAGGGATGACAGACAAGGACTTGGTTTTACTCAGTGCGGCACACACTATTGGAACCACGGCATGCTTCTTCATGACAAGGCGCCTCTACAACTTCTTCCCGGGTGGTGGATCAGATCCCGAAATAAATCCGATGATGTTGCCGGAGCTAAAGTCGCAATGCCCTCGAAATGGCAACGTCAACACCCGTCTCGGCATGGACCGTGGCAGCCCCCGCACGTTCGACATTCACATTCTTCAAAACATTAGAAATGGCTTCGCCGTCCTCGCCTCCGATGCTCGCCTAAACGACGACCCATCGACTCGAGCTGTTATGGACTCCTACTTCAGCCCTCTCGCCCCCATTCTCGGTCCCTCATTTCAGGACGATTTCGTCAACTCGATAGTGAGAATGGGCGAGATTGGGGCCAAAACTGGGTCTCAAGGAGAGATTCGAAGGGTATGTTCTGCTTTTAACTCAAGGTAA 984 51.12 MAKCVNFLYLFVFFGCFAPFSQAQLKFGFYAQSCPSAESIVRSVVSDAVRNDGNMAAVLLRLHFHDCFVEGCDGSILIDTAPNPEKGAFGHQGVGGFEVIERAKEELESQCPGVVSCADIVAMAARDAIVMANGPEYEVLTGRRDGRVSDVSLADSLPDVSDSIQVLKNKFGQKGMTDKDLVLLSAAHTIGTTACFFMTRRLYNFFPGGGSDPEINPMMLPELKSQCPRNGNVNTRLGMDRGSPRTFDIHILQNIRNGFAVLASDARLNDDPSTRAVMDSYFSPLAPILGPSFQDDFVNSIVRMGEIGAKTGSQGEIRRVCSAFNSR 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2222318 2226896 - CmoCh19G003030.1 Cmo19g00303 403463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00303 327 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Cmo19g00303 327 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 ProSiteProfiles Plant heme peroxidase family profile. 24 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cmo19g00303 327 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PANTHER PEROXIDASE 25-RELATED 13 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cmo19g00303 327 Gene3D Peroxidase, domain 2 158 304 - -
Cmo19g00303 327 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Cmo19g00303 327 Pfam Peroxidase 41 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo19g00303 327 Gene3D - 28 325 - -
Cmo19g00303 327 PANTHER PEROXIDASE 13 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g00284 Cmo-Chr19:2073616 Cmo19g00303 Cmo-Chr19:2222318 3.23E-92 dispersed
Cmo19g00285 Cmo-Chr19:2076516 Cmo19g00303 Cmo-Chr19:2222318 6.83E-93 dispersed
Cmo19g00303 Cmo-Chr19:2222318 Cmo17g00980 Cmo-Chr17:8520503 2.03E-73 dispersed
Cmo19g00303 Cmo-Chr19:2222318 Cmo02g00159 Cmo-Chr2:771614 1.23E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00303 K00430 - csv:101221831 522.316