Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo19g00423 | ATGGGGCTACCGGTGAAGGCTTTTCCGTTCACTGTGGTGAGTCATGTACTGGCAATCGTGGCGCTGATTCTTGTCCTCGTTTGGGCCGTTCACTTCAGAGGCGGCCTGGCTTGGGAGGCCGTCAATAAGAACCTCATCTTCAACATTCATCCCGTTCTTATGCTACTCGGACTGATCATCATAGGAGGAGAAGGTAACGAAACAATAATTAGTTATAAATCACTGCCATTGAGAAAAGAAGTAAAAAAGGTGATCCATTTGGTGCTACACGGCGTCGCTTTGGCACTGGGCATCGTGGGAATCTGGGCAGCATTCAAAAACCATAATGAAAGCGGGATCCCTAATCTTTACAGCTTGCATTCCTGGATTGGAATTGGCGTAATTGCCCTGTATGGTGTCCAGTGGGTGTACGGACTGGTGACATTCTTCTACCCTGGCGGGTCGGCGGATCTCCGAAGAGCATCACTTCCATGGCATGTGGTTGTGGGTATCAGTGTGTACATATTGGCGGTGGGGAACTCGGCGCTGGGGTTCTTAGAGAAGCTGACGTTTCTGGAGAGCGGGGGGGTGGACAAATACGGGAGTGAGGCGTTTCTTGTGAACTTCACTGCTATCATCACTATAGTATTTGGAGCGTCTGTGCTTTTGAGTGTTATTTCGCAGCACTCCGTTGAACAACACGACGCTGATGCCTATACTGCTATATGA | 708 | 49.44 | MGLPVKAFPFTVVSHVLAIVALILVLVWAVHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEGNETIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIWAAFKNHNESGIPNLYSLHSWIGIGVIALYGVQWVYGLVTFFYPGGSADLRRASLPWHVVVGISVYILAVGNSALGFLEKLTFLESGGVDKYGSEAFLVNFTAIITIVFGASVLLSVISQHSVEQHDADAYTAI | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 5077696 | 5081582 | + | CmoCh19G004230.1 | Cmo19g00423 | 403583 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo19g00423 | 235 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 | 1 | 235 | - | - | |
| Cmo19g00423 | 235 | SMART | 561_7 | 49 | 178 | IPR006593 | - | |
| Cmo19g00423 | 235 | PANTHER | CYTOCHROME B561-RELATED | 1 | 235 | IPR043205 | GO:0016491 | |
| Cmo19g00423 | 235 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 219 | IPR006593 | - | |
| Cmo19g00423 | 235 | Pfam | Eukaryotic cytochrome b561 | 49 | 184 | IPR006593 | - | |
| Cmo19g00423 | 235 | Gene3D | - | 3 | 228 | - | - | |
| Cmo19g00423 | 235 | CDD | Cyt_b561_ACYB-1_like | 42 | 186 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo04g00036 | Cmo-Chr4:228772 | Cmo19g00423 | Cmo-Chr19:5077696 | 1.57E-55 | dispersed | |
| Cmo04g02972 | Cmo-Chr4:21006270 | Cmo19g00423 | Cmo-Chr19:5077696 | 2.70E-64 | dispersed | |
| Cmo15g00206 | Cmo-Chr15:986101 | Cmo19g00423 | Cmo-Chr19:5077696 | 2.70E-61 | dispersed | |
| Cmo18g01070 | Cmo-Chr18:11311575 | Cmo19g00423 | Cmo-Chr19:5077696 | 4.70E-36 | dispersed | |
| Cmo19g00423 | Cmo-Chr19:5077696 | Cmo02g01080 | Cmo-Chr2:6577235 | 6.44E-117 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo19g00423 | K08360 | - | csv:101209308 | 346.28 |