Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00466 ATGGTCAACTACACCATACCAAAGGGATGGAACGTACTAATTTGGACCAGAGCTATTCATATGGACCCTCACTTATATTCAAATCCACGAGAGTTTGATCCTTCAAGATGGGAGAATTATTCACCAAAGCCAGGAACATTCATCCCTTTTGGAATCGGAACTAGGTTTTGTCCTGGAAGTGAACTTACCAAGCTTGAGATTACAATTTTACTTCATCACTTTATCCTCAATTACAAAATGGAACGTGTCAATCCAAAATGCTGCATCACTCACTTGCCTGCCCCCAAGCTCGTAGACAATTGCCTTTGCACAATTACCAAGCTCCCATGA 330 41.52 MVNYTIPKGWNVLIWTRAIHMDPHLYSNPREFDPSRWENYSPKPGTFIPFGIGTRFCPGSELTKLEITILLHHFILNYKMERVNPKCCITHLPAPKLVDNCLCTITKLP 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5608295 5608864 + CmoCh19G004660.1 Cmo19g00466 403626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00466 109 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 50 59 IPR017972 GO:0005506|GO:0016705
Cmo19g00466 109 PRINTS E-class P450 group I signature 57 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00466 109 PRINTS E-class P450 group I signature 47 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00466 109 PRINTS E-class P450 group I signature 15 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00466 109 PANTHER ENT-KAURENOIC ACID OXIDASE 2-LIKE 3 105 - -
Cmo19g00466 109 Pfam Cytochrome P450 3 82 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00466 109 Gene3D Cytochrome P450 2 100 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00466 109 PANTHER CYTOCHROME P450 26 3 105 - -
Cmo19g00466 109 SUPERFAMILY Cytochrome P450 3 87 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g00466 Cmo-Chr19:5608295 Cmo19g00462 Cmo-Chr19:5581113 8.99E-48 dispersed
Cmo19g00464 Cmo-Chr19:5594537 Cmo19g00466 Cmo-Chr19:5608295 2.69E-73 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00466 K04123 - cpep:111776392 228.409