Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00552 ATGGCAACCTCAGGCCAGTCGCTCCGCTCTTCCACCGCTGCTTCTAGTGGAGGAAACTTCGACTTGCTTAATCGTATCCTAGCCGACCTCTGCACTCGCGGTCATTCGAAGGAGGGGGCTCCATTAGCATTAAAGAAACATATTGAAGAAGCAGCTCGTGATCTTACTGGGGAAGCATTTTCCCGGTTCATGGATCAATTATATGATCGTATTTCTATTCTTTTAGAAAGTAACGATGTACCTGAAAATTTGGGAGCTTTAAGGGCTATTGATGAGTTGATTGATGTGGCTCTGGGTGAAAATGCTTCAAAAGTTTCGAGGTTTTCTAATTATATTAGGAATGTATTTGAGCTGAAGCGTGATCCTGAAATTTTGGTACTAGCTAGCCGAGTTTTGGGTCATCTAGCTAGGGCAGGTGGAGCAATGACAGCAGATGAAGTTGAACGCCAGGTAAAAATTGCTTTGGACTGGTTGCGTGGGGAAAGGATCGAGTATCGTCGCTTTGCTGCTGTCTTAATTCTGAAGGAAATGGCAGAAAGTGCTTCGACAGTCTTCAATGTGCATGTACCAGAATTTGTTGATGCCATTTGGGTTGCTTTGAGGGATCCACAGCTGGCTGTTCGGGAGCGTGCTGTAGAGGCATTGCGTGCTTGCCTTCGTGTCATTGAAAAACGAGAGACGCGTTGGCGTGTGCAATGGTCAGTTATAGAAAACATTGTAGGTATGCTTTCATTTGACAGGTACTATCGAATGTTTGAAGCCACACAAGATGGGTTGGGTAAAAATGCTCCTGTTCACAGCATACATGGTTCCTTACTTGCAGTTGGTGAACTTTTGAGGAATACCGGTGAATTTATGATGTCAAGATATAGAGAAGTTGCTGATATTGTCCTTAGGTACCTGGAGCACCGAGATCGTCTTGTACGATTGAGCATAACTTCATTATTACCTCGAATTGCTCATTTTTTACGTGATAGATTTGTGACAAACTATTTAACGATATGCATGAATCATATTCTCACTGTTTTGAGAACACCAGCTGAGCGTGCCAGTGGGTTCATTGCGCTTGGAGAGATGGCTGGTGCTTTAGATGGGGAACTCAAACACTATTTGCCGACTATAACACATCACTTACGTGATGCAATTGCTCCTCGTCGTGGTAGACCCTCACTTGAGGCGTTGGCTTGTGTTGGAAGCATTGCAAAAGCCATGGGGCCTGCTATGGAATCTCATGTTCGGGGTCTCCTGGATGTTATGTTCTCAGCTGGTCTGTCCCCTACACTTGTAGAATCTCTGGAGCAAATTACTATCAGTATTCCCTCCTTGCTTCCCAGTATTCAAGAACGGCTTTTAGAATGCATTTCAGTGGTTCTTTCAAAATCACATTCTCCTCAGGGTAGGCCAAATGCTTTGGTGGGAAGGGGAAATGTGATGACACTTCCTCAGCCAGTGTCAGATCTTTGTGGTTCATCTCTTGTGCAGCTTGCATTGCAAACACTTGCTCGTTTTAACTTCAAGGGTCACGACCTTCTTGAGTTTGCACGGGAGTCAGTCATTGTGTATTTGGATGATGAAGATGGAGCAACACGTAAAGATGCTGCCCTATGTTGTTGTAAATTAGTTGCAAATTCCTTTTCCGTCATGACATGCACACAATTTGGTACTAGTAGGCCTAGTCGCGCAAGTGGGAAACGTCGCTGCCTTGTTGAGGAGCTTGTGGAAAAGCTTCTTATTGCAGCTGTTGCAGATGCTGATGTTACTGTTCGCAATTCCATCTTTGTTTCTCTACATGGAAATAGGGGTTTTGACGATTTTATAGCACAGGCTGATAGTCTGAGTGCAGTATTTGCTGCACTTAATGATGAGGATTTTGATGTTCGAGAGTATGCAATATCCGTCGCTGGGAGATTATCTGAAAAAAATCCTGCATACGTTCTTCCAGCACTTCGTCGCCATCTTATACAATTGTTAACCTATTTGGACCAGAGTGCAGATAATAAATGCCGAGAAGAAAGTGCGAAGTTGTTGGGTTGCTTGATACGCAATTGTGAACGATTAATACTTCCTTACATTGCTCCAGTCCACAAGGCACTTGTGGCAAGGCTTAGCGAGGGCACTGGGGTAAATGCTAATAATGGCATTATCACTGGAGTTCTGGTTACTGTTGGAGATCTTGCTAGAGTGGGTGGTTCTGCAATGAGACAATACCTCCCTGAACTCATGCCGTTGATTGTTGAAGCCCTGTTGGACGGAGCTGCTGTTGCAAAACGTGAAGTGGCTGTCTCTACCCTTGGTCAAGTTCTAGGAATAATGGGTGCTCTGGATCCTCATGTGCACAAAAGGAACCAACTAAGTTTGCCAGGGTCTCATGGAGAAGTTACACGTGCAGCAAGTGATTCTGGTCAACATATTCAATCTGTGGATGAACTTCCTATGGAGCTGTGGCCCTCGTTTGCAACATCCGAGGATTATTTTTCCACGGTGGCAATTAATTCACTCTTAAGAATACTTCGGGATCCTTCCCTTGCGAGTTATCATCTTAAGGTGGTTGGATCGCTTATGTTCATATTCAAGTCTATGGGCCTCGGTTCTGTTCCATACTTACCCAAGGTTTTGCCCGATCTATTCCACACTGTTAGTACATGTGATGATACTTTGAAGGACTTCATAACGTGGAAACTTGGAACTCTAGTGTCTATTGTCCGCCAGCACATTCGCAAATATTTACCTGAATTGCTCTCTCTTATATCAGAATTGTGGTCATCCTTCAATTTTCCCTCTACCATTCGTCCTCCGCTTGGCTATCCGGTTCTTCACTTAGTGGAACAACTTTGTTTAGCTCTCAATGATGAGTTCAGAATGATTCTCCACATTATTCTTCCTTGTTGTATTCAAGTACTAAGTGATGCTGAGCGGTGTAATGATTATACCTATGTTCTTGATATTCTTCACACTCTTGAAGTTTTTGGGGGCACATTGGACGAACATATGCATCTTCTTCTTCCTGCACTTATTCGTTTATTCAAGGTGGATGCTCCAGTAGACATAAGACGTGCTTCAATCAGAACTTTGACAAGATTAATCCCTCGTGTGCAGGTAACTGGCCATATATCTTCTCTTGTGCATCACCTCAAGCTTGTCTTGGATGGAGGTAGGATTCTTGCTTTAGGAGGGCTTGGACAAGGTGATTCTCTCTCTGCCTTCTTGTGTTGGCTTGTAGTGGATATCCTGAGTAGACTAGTCACGACGGGGAAGAATGATGAGCTCCAAAAGGATGCCGTTGATGCACTTTGTTGCCTAGCCCAGGCCCTTGGGGAAGATTTCACCGTCTTTATTCCATCAATACACAAGCTCCTATTGAAACATCGCTTGCGGCATAAAGAATTTGAGGAAATTGAAGGACGTTTGCGAAGACGAGAGCCATTGATCTTGGGGAGCACTACCGCTCAACGGTTGAGTCGGCGAGTTCCAGTGGAAGTCATCAGTGATCCTCTAAATGATGGTGACTTTGACCCATATGAAGATAGGTCTGATGTGCATAAACAGTTTAGAGGTCACCAGGTTAATGATGGCCGATTGCGCACTGCTGGAGAGGCTTCCCAGCGAAGTACTAAGGAAGATTGGGCTGAATGGATGAGGCATTTCAGCATTGAGCTTCTTAAGGAATCACCTTCACCTGCATTACGGACCTGTGCAAGACTTGCGCAGTTGCAGCCTTTTGTCGGGCGTGAGTTATTTGCAGCTGGTTTTGTTAGCTGTTGGGCACAATTAAACGAGACAAGTCAGACACAGTTAGTCCGGAGCTTGGAGATGGCCTTTTCCTCCCCAAATATTCCTCCTGAAATTTTGGCGACGCTTCTTAACCTGGCGGAGTTTATGGAACATGATGAGAAGCATCTTCCTATTGACATTCGTCTTCTTGGTGCTCTTGCAGAGAAGTGTCGTGCATTCGCCAAAGCTCTGCATTACAAAGAAATGGAATTTAGGGATGCGAGTACCAAGAAGATGGATACCAATCCTGTTGCTGTTGTGGAAGCACTTATTCATATAAACAATCAGTTGCACCAACATGAGGCTGCTGTCGGAATATTGACATATGCTCAACAACATCTGGAGGTTCAGCTGAAAGAGTCCTGGTATGAGAAGCTGCAACGTTGGGAAGATGCTCTTAAGGCATATACCGCCAAGGCATCGCAAGCATCAAATCCACATCTTGTATTAGATGCCATGTTAGGACGGATGAGATGCCTTGCTGCATTGGCTCGATGGGAAGAGCTTAATAACCTATGCAAGGAGTATTGGACCCCTGCCGAGCCAGCTGCTCGGCTAGAAATGGCTCCAATGGCTGCGAGTGCTGCATGGAACATGGGAGAGTGGGACCAAATGGCAGAATATGTTTCTCGGTTAGATGATGGTGATGAAACCAAACTTCGTAGCTTGGGTAACACTGCTGCTAGTGGTGATGGAAGCAGTAGTGGAACTTTCTATAGGGCTGTCTTGTTAGTTCGTAAAGGAAAGTATGATGAAGCACGTGAGTATGTTGACAGAGCTAGAAAATGTTTAGCAACAGAACTTGCTGCTTTGGTACTGGAGAGTTATGAGCGTGCTTATAGCAATATGGTCAGAGTTCAGCAACTTTCAGAACTAGAGGAGGTTATTGATTACTGCACACTTCCTGTTGGGAATTCCGTTGCTGAAGGACGACGAGCTCTTATTCAAAATATGTGGACAGAACGCATACAAGGAGCAAAACGGAATGTTGAGGTCTGGCAAGCAGTATTGGCTATTAGAGCCCTTGTGCTGCCTCCAGCAGAAGATATTGAGACATGGCTAAAGTTTGCTTCTCTTTGTCGGAAAAGTGGGAGAGTCAGCCAGGCAAGATCTACTCTTGTTAAGCTCTTACAGTACGATCCTGAAACATCTGAAAATGGATGGTATTCTGGGCCACCTCAAGTAATGTTTGCATACTTGAAATACCAATGGTCACTTGGGGAGGATATTAAACGCAAGGAAGCATTTGCTAGGTTACAAGTTTTGTCTAGGGAGCTATCATCTTCACCTATTATCCAACCTGTCAAGCCAAGTAGCTTATCAAGTGGTAGAAGTTCAACTGCACCACTGCTTGCTCGTGTATGCCTTGAACTTGGAACCTGGCAATGGGCCTTATCTCCTGGATTAGATGATGATTCTATACAAGAAATTCTGACCGCGTTTCAGAATGCCACCCAGTGTGCGAATACTTGGGCAAAGGCATGGCATATGTGGGCATTGTTTAATACAGCCGTGATGTCTCATTATACAATGAGAGGATTTCCTGATGTTGCAGCACAGTTCGTTGTTGCTGCAGTTACAGGATATTTTCACTCTATAGCATGTGCTGCAAATTCTAAAGGTGTTGATGACAGTTTACAGGATATCCTCCGTCTTCTCACTTTATGGTTCAACCATGGAGCTACTGCAGATGTCCAAATGGCACTACAAAAAGGGTTTGCTCATGTAAATATCAACACATGGCTGGTAGTTTTACCTCAGATAATTGCAAGGATACATTCAAATAACCATGCAGTAAGAGAACTCATACAGTCACTATTGGTTCGAATTGGGCAAAGTCATCCTCAGGCCCTCATGTACCCTCTCCTTGTAGCATGTAAATCAATTAGCAATTTACGGCGAGCTGCAGCTCAAGAAGTTGTTGACAAAGTTCGACAACATAGTGGTGTTCTTGTTGATCAGGCTCAACTTGTTTCTAAAGAATTGATTCGAGTTGCCATACTTTGGCATGAAACATGGCATGAGGCTCTAGAGGAAGCCAGTCGTTTGTACTTCGGTGAACATAATATTGAGGGGATGCTCAAGGTTTTGGAGCCCTTGCATGAAATGCTTGAAGACGGGGCTATGAAGAATAACACAACGATAAAGGAAAGGGCATTCATTGAGGCATATCGCCGCGAGTTGCTTGAAGCCTATGAATGTTGCATGAAATATAAGAAAACCGGGAAAGATGCTGAACTTACTCAGGCTTGGGATCTGTATTACCATGTATTTAGAAGAATAGATAAGCAACTTCAGAGCCTTACAACTCTGGACCTTCAGTCTGTTTCACCAGAGTTACTAGAATGTCGTAATCTGGAGCTTGCAGTTCCGGGTACTTATCGTGCAGAGTCACCTGTCGTGACAATTGCATCATTTGCAACCCAGCTTGTTGTGATAACATCAAAACAGCGGCCCCGAAAGTTAACGATTCATGGAAGTGATGGTGAGGATTATGCATTCTTACTGAAGGGGCACGAAGACTTGCGGCAAGATGAGCGTGTCATGCAGCTTTTTGGCTTGGTTAATACTTTGCTGGACAATTCAAGAAAAACTGCTGAAAAAGATCTTTCCATTCAACGGTATGACGTCATTCCACTATCGCCAAATAGTGGATTGATTGGTTGGGTCCCACATTGTGACACCCTGCATCAACTTATCCGTGAGTATAGAGATGCTAGGAAGATAACCTTGAACCAAGAGCACAAATACATGCTTAGTTTTGCCCCCGATTATGATCATTTACCGCTCATAGCTAAAGTGGAAGTGTTTGAGTATGCATTACACAATACCGAAGGAAATGACCTTTCAAAGGTTCTATGGTTGAAAAGTCGCACATCTGAGGTATGGTTAGAGAGGAGGACCAATTATACCCGAAGTTTGGCAGTAATGAGTATGGTTGGTTACCTTCTTGGTTTGGGTGATCGACACCCAAGTAACCTTATGCTGCACCGTTATACTGGTAAGATCTTGCACATTGATTTTGGCGATTGTTTTGAAGCTTCAATGAACAGAGAAAAGTTTCCTGAGAAGGTACCCTTCCGATTGACTAGAATGCTTGTCAAAGCTATGGAGGTTAGTGGTATAGAGGGAAACTTCCGTTCCACTTGTGAAAATGTGATGCAGGTTCTTCGATCAAACAAGGATAGTGTTATGGCTATGATGGAGGCTTTTGTTCACGACCCTCTCATAAATTGGCGTCTTTTCAACTTCAATGAAGTCCCTCAAATGTCGATGTTTTCGAGCACTCATGCCCCTCCAGTTGTGAATGCTGAAGAGTCTGCTCAAAGTCGTGAACTTCTTCAGCCTCAACGAGGTGCCCGTGAAAGAGAGCTTCTTCAGGCTGTTAATCAACTTGGTGATGCCAACGAGGTCTTGAATGAGCGTGCTGTTGTTGTGATGGCTCGTATGAGCAATAAACTAACTGGACGGGATTTCCCCACTTGTTCGTCTATGTCGACTGCTTCTGTTCAGCTTGCAGTAGACCACAGCACCTTAATAGCTGGGGATTCCCGTGAAGTTGATCATGGTCTCTCTGTTAAGGTTCAAGTTGAGAAGTTGATTGGCCAAGCTACATCGCACGAAAACTTATGTCAAAACTACGTCGGGTGGTGCCCCTTTTGGTAA 7437 44.28 MATSGQSLRSSTAASSGGNFDLLNRILADLCTRGHSKEGAPLALKKHIEEAARDLTGEAFSRFMDQLYDRISILLESNDVPENLGALRAIDELIDVALGENASKVSRFSNYIRNVFELKRDPEILVLASRVLGHLARAGGAMTADEVERQVKIALDWLRGERIEYRRFAAVLILKEMAESASTVFNVHVPEFVDAIWVALRDPQLAVRERAVEALRACLRVIEKRETRWRVQWSVIENIVGMLSFDRYYRMFEATQDGLGKNAPVHSIHGSLLAVGELLRNTGEFMMSRYREVADIVLRYLEHRDRLVRLSITSLLPRIAHFLRDRFVTNYLTICMNHILTVLRTPAERASGFIALGEMAGALDGELKHYLPTITHHLRDAIAPRRGRPSLEALACVGSIAKAMGPAMESHVRGLLDVMFSAGLSPTLVESLEQITISIPSLLPSIQERLLECISVVLSKSHSPQGRPNALVGRGNVMTLPQPVSDLCGSSLVQLALQTLARFNFKGHDLLEFARESVIVYLDDEDGATRKDAALCCCKLVANSFSVMTCTQFGTSRPSRASGKRRCLVEELVEKLLIAAVADADVTVRNSIFVSLHGNRGFDDFIAQADSLSAVFAALNDEDFDVREYAISVAGRLSEKNPAYVLPALRRHLIQLLTYLDQSADNKCREESAKLLGCLIRNCERLILPYIAPVHKALVARLSEGTGVNANNGIITGVLVTVGDLARVGGSAMRQYLPELMPLIVEALLDGAAVAKREVAVSTLGQVLGIMGALDPHVHKRNQLSLPGSHGEVTRAASDSGQHIQSVDELPMELWPSFATSEDYFSTVAINSLLRILRDPSLASYHLKVVGSLMFIFKSMGLGSVPYLPKVLPDLFHTVSTCDDTLKDFITWKLGTLVSIVRQHIRKYLPELLSLISELWSSFNFPSTIRPPLGYPVLHLVEQLCLALNDEFRMILHIILPCCIQVLSDAERCNDYTYVLDILHTLEVFGGTLDEHMHLLLPALIRLFKVDAPVDIRRASIRTLTRLIPRVQVTGHISSLVHHLKLVLDGGRILALGGLGQGDSLSAFLCWLVVDILSRLVTTGKNDELQKDAVDALCCLAQALGEDFTVFIPSIHKLLLKHRLRHKEFEEIEGRLRRREPLILGSTTAQRLSRRVPVEVISDPLNDGDFDPYEDRSDVHKQFRGHQVNDGRLRTAGEASQRSTKEDWAEWMRHFSIELLKESPSPALRTCARLAQLQPFVGRELFAAGFVSCWAQLNETSQTQLVRSLEMAFSSPNIPPEILATLLNLAEFMEHDEKHLPIDIRLLGALAEKCRAFAKALHYKEMEFRDASTKKMDTNPVAVVEALIHINNQLHQHEAAVGILTYAQQHLEVQLKESWYEKLQRWEDALKAYTAKASQASNPHLVLDAMLGRMRCLAALARWEELNNLCKEYWTPAEPAARLEMAPMAASAAWNMGEWDQMAEYVSRLDDGDETKLRSLGNTAASGDGSSSGTFYRAVLLVRKGKYDEAREYVDRARKCLATELAALVLESYERAYSNMVRVQQLSELEEVIDYCTLPVGNSVAEGRRALIQNMWTERIQGAKRNVEVWQAVLAIRALVLPPAEDIETWLKFASLCRKSGRVSQARSTLVKLLQYDPETSENGWYSGPPQVMFAYLKYQWSLGEDIKRKEAFARLQVLSRELSSSPIIQPVKPSSLSSGRSSTAPLLARVCLELGTWQWALSPGLDDDSIQEILTAFQNATQCANTWAKAWHMWALFNTAVMSHYTMRGFPDVAAQFVVAAVTGYFHSIACAANSKGVDDSLQDILRLLTLWFNHGATADVQMALQKGFAHVNINTWLVVLPQIIARIHSNNHAVRELIQSLLVRIGQSHPQALMYPLLVACKSISNLRRAAAQEVVDKVRQHSGVLVDQAQLVSKELIRVAILWHETWHEALEEASRLYFGEHNIEGMLKVLEPLHEMLEDGAMKNNTTIKERAFIEAYRRELLEAYECCMKYKKTGKDAELTQAWDLYYHVFRRIDKQLQSLTTLDLQSVSPELLECRNLELAVPGTYRAESPVVTIASFATQLVVITSKQRPRKLTIHGSDGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLDNSRKTAEKDLSIQRYDVIPLSPNSGLIGWVPHCDTLHQLIREYRDARKITLNQEHKYMLSFAPDYDHLPLIAKVEVFEYALHNTEGNDLSKVLWLKSRTSEVWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYTGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNKDSVMAMMEAFVHDPLINWRLFNFNEVPQMSMFSSTHAPPVVNAEESAQSRELLQPQRGARERELLQAVNQLGDANEVLNERAVVVMARMSNKLTGRDFPTCSSMSTASVQLAVDHSTLIAGDSREVDHGLSVKVQVEKLIGQATSHENLCQNYVGWCPFW 2478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6341570 6383718 + CmoCh19G005520.1 Cmo19g00552 403712

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00552 2478 Coils Coil 1376 1396 - -
Cmo19g00552 2478 Gene3D - 816 987 IPR011989 -
Cmo19g00552 2478 Gene3D - 250 471 IPR011989 -
Cmo19g00552 2478 Gene3D - 2189 2363 IPR036940 GO:0016301
Cmo19g00552 2478 SUPERFAMILY ARM repeat 1070 1876 IPR016024 -
Cmo19g00552 2478 SMART DUF3385_3 733 902 IPR024585 -
Cmo19g00552 2478 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 1079 2476 - -
Cmo19g00552 2478 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 766 1050 - -
Cmo19g00552 2478 ProSiteProfiles FAT domain profile. 1306 1885 IPR014009 -
Cmo19g00552 2478 Pfam FATC domain 2448 2478 IPR003152 GO:0005515
Cmo19g00552 2478 SUPERFAMILY Protein kinase-like (PK-like) 2003 2342 IPR011009 -
Cmo19g00552 2478 PANTHER SERINE/THREONINE-PROTEIN KINASE TOR 5 767 IPR026683 GO:0004674
Cmo19g00552 2478 PANTHER SERINE/THREONINE-PROTEIN KINASE TOR 1079 2476 IPR026683 GO:0004674
Cmo19g00552 2478 PANTHER SERINE/THREONINE-PROTEIN KINASE TOR 766 1050 IPR026683 GO:0004674
Cmo19g00552 2478 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 5 767 - -
Cmo19g00552 2478 SUPERFAMILY ARM repeat 59 344 IPR016024 -
Cmo19g00552 2478 Pfam FAT domain 1446 1811 IPR003151 GO:0005515
Cmo19g00552 2478 SUPERFAMILY FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 1922 2019 IPR036738 GO:0044877
Cmo19g00552 2478 SMART FATC_2 2446 2478 IPR003152 GO:0005515
Cmo19g00552 2478 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 2063 2380 IPR000403 -
Cmo19g00552 2478 Pfam Phosphatidylinositol 3- and 4-kinase 2089 2337 IPR000403 -
Cmo19g00552 2478 Gene3D - 1921 2017 IPR036738 GO:0044877
Cmo19g00552 2478 Gene3D - 493 783 IPR011989 -
Cmo19g00552 2478 Pfam Domain of unknown function (DUF3385) 738 902 IPR024585 -
Cmo19g00552 2478 SMART Rapamycin_bind_3 1918 2021 - -
Cmo19g00552 2478 Gene3D Tetratricopeptide repeat domain 1198 1758 IPR011990 GO:0005515
Cmo19g00552 2478 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 2230 2250 IPR018936 GO:0016301
Cmo19g00552 2478 ProSiteProfiles FATC domain profile. 2446 2478 IPR003152 GO:0005515
Cmo19g00552 2478 Pfam FKBP12-rapamycin binding domain 1918 2020 IPR009076 GO:0044877
Cmo19g00552 2478 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 2093 2107 IPR018936 GO:0016301
Cmo19g00552 2478 Gene3D - 39 244 IPR011989 -
Cmo19g00552 2478 SMART pi3k_hr1_6 2090 2392 IPR000403 -
Cmo19g00552 2478 SUPERFAMILY ARM repeat 253 1429 IPR016024 -
Cmo19g00552 2478 Gene3D - 2018 2145 - -
Cmo19g00552 2478 CDD PIKKc_TOR 2060 2338 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00552 K07203 MTOR, FRAP, TOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] - csv:101212051 4561.13
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g00552 Cmo-Chr19:6341570 Cmo20g00889 Cmo-Chr20:4487120 1.90E-67 dispersed
Cmo19g00552 Cmo-Chr19:6341570 Cmo11g01757 Cmo-Chr11:12373775 4.32E-19 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g774 . . . . . Bpe12g00734 . . Cmo19g00552 . . . . . . . Cpe15g00427 Bhi05g01001 . . . . . . Cla02g00700 Cam02g0733 Cec02g0747 Cco02g0772 Clacu02g0744 Cmu02g0739 Cre02g1052 Cone12ag1029 . . . Lsi03g00601 Csa07g00668 . Cme01g00136 . Blo13g00276 Bda15g00469 . . . . Bma08g00017 . . . . Cma19g00538 . Car19g00395 . . . . . . . . . . . . . . . . . . Chy01g00147 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006863 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 2 1 1 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo19g00552 Cmo_Chr19 FPKM 6.165063 6.517847 6.853003 7.778958 7.367987 6.997163 7.437028 6.893521 6.773608 7.453287