Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00576 ATGATGTTGAGGTCGTGTTGTAGGCCGCTCGAGCGGTTTATTGGACGGTGGGCCGGCGATGGGCTGCTGTGGCAGTCGGAATTGAAGGCTCATGCTTCTGGTGATTATTCGATCGCTGTTGTGCAGGCTAATTCCTGTCTTGAGGATCAGAGTCAGGTGTTCACGTCTTCCTCTGCTACGTATGTTGGTGTTTATGATGGCCATGGCGGCCCTGAGGCTTCTCGCTTTGTGAATAAGCATCTTTTTCCTTATATGCACAAGTTTGCTTCAGAACAAGGTGGGCTATCGGAGGATGTTATTAAGAAGGCATTCAATGCCACAGAAGAGGAGTTTCTGCGTTTGGTTAAGCGGGTTTTGCCTGCAAAGCCACAGATTGCTTCAGTTGGATCATGCTGTCTTGTAGGTGCAATTTCGAATACGAAGCTATACGTAGCGAATCTCGGGGATTCGAGAGCTGTGCTTGGCCGTAGAGTTTCAGAGAGTAAGAGAACTCCGGTAGTCGCAGAACGGTTGTCGACTGATCACAATGTTGGAGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGATTCCCATGTAGTTGTCTATACCCGTGGTGTTTGGAGGATCAAAGGCATAATTCAGGTTTCAAGATCTATAGGTGACGTCTATCTAAAGAAACCCGAATTCAACCGGGATCCAATATTCCAACAATTCGGGAACCCCGTTCCATTGAAGCGAGCAGTAATGACTGCCGAACCTTCAATCCTAACTCGAGAGCTTAAACCTCAAGACCTATTCCTGATCTTTGCATCAGATGGCCTCTGGGAACAACTTACTGATGAGGCTGCTGTGGAGATAGTTTCCAAGAACCCAAGAGCAGGAATTGCAAAGAGATTAGTTCGTGCAGCCCTCCACGAGGCAGCAAGGAAACGGGAGATGAGATACACCGACTTAAAGAAGATCGAAAAGGGGATTCGGCGTCATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAACATAAGCTCACACACCCGTGGAGCTAAGAACGCTATTGCCGGGTACACTACTGCACCTGTTGATATTTTCTCTCTTAACTCAACCTATGAGGCAGAGGAAAAAGTTCACACAAAGATCTAA 1140 47.19 MMLRSCCRPLERFIGRWAGDGLLWQSELKAHASGDYSIAVVQANSCLEDQSQVFTSSSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEEFLRLVKRVLPAKPQIASVGSCCLVGAISNTKLYVANLGDSRAVLGRRVSESKRTPVVAERLSTDHNVGVDEVRKEVVALHPDDSHVVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRAVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVSKNPRAGIAKRLVRAALHEAARKREMRYTDLKKIEKGIRRHFHDDITVIVVYLDHNISSHTRGAKNAIAGYTTAPVDIFSLNSTYEAEEKVHTKI 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6559825 6563424 + CmoCh19G005760.1 Cmo19g00576 403736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00576 379 CDD PP2Cc 42 337 IPR001932 -
Cmo19g00576 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Cmo19g00576 379 Gene3D - 24 348 IPR036457 -
Cmo19g00576 379 SUPERFAMILY PP2C-like 43 338 IPR036457 -
Cmo19g00576 379 SMART PP2C_4 25 335 IPR001932 -
Cmo19g00576 379 Pfam Protein phosphatase 2C 51 305 IPR001932 -
Cmo19g00576 379 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 371 - -
Cmo19g00576 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Cmo19g00576 379 PANTHER ALPHABET, ISOFORM E-RELATED 4 371 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01409 Cmo19g00576 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g00576 Cmo-Chr19:6559825 Cmo14g00420 Cmo-Chr14:1997601 2.11E-139 dispersed
Cmo11g01409 Cmo-Chr11:9897645 Cmo19g00576 Cmo-Chr19:6559825 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00576 - K01102 csv:101216862 690.649