Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00620 ATGGGTATGTTTTCAAAGCCAAAAATCTGTAGAACAGGAACGACCCATAATGATTCGATGGGTTTTAATGGGGTTTCTCCAGCAAGCAAGTGGAAATGGACCCATTTCTTGCCTCTGTTTGTAGCGATGGTGGTCATAGCAGAGATCGCTTCTCTAAGTCGGCTCGACATCGCGAAAAATGCGGCTATGGTGGACTCTTGGGTCGACTTATTCTATGGGCCTCCGCCTTTGCACGAAGAAATCGAAGATGTTAGCACTGGAATCACAATTGATGGAGTAATGGGTAGAGTTAACTGTGAGGAGTGGCTGGAGAAGGTGGATGCGGTGGAGTACTCTAGGGACTTCAAAAGGAAACCTGTTTTGGTTTCTGGGTCCGAGAAGGATTGGAAAACTTGTGATGTGGGATGCCAGTTTGGATTGAATCCTGGTGAGCAGCCTGATGCTGCATTGGGATCACCTCAACAAGGTCGTGTTGCTAGCGTCCTTCGGTCGATGGAATCGTCGCATTACTATCCAGAGAACAATATTGATTTGGCAAGACGGAAGGGTTACACTGTGGTTATGACCACTAGTCTTTCATCAGACGTTCCTGTTGGATATTTTTCGTGGGCAGAATACGACATAATGGCACCAGTGCAACCAAAGACGGAGCCTGCCCTTGCAGCTGCCTTCATTTCGAATTGTGGCGCCCGCAACTTTCGTTTGCAAGCTCTTGAAGCACTTGAGAAATTGGATGTCAAAATTGATTCATATGGTAGTTGCCACAGGAACCGCGATGGAAGAGTTGACAAAGTGGAAACTTTGAAGCGCTACAAGTTCAGCTTGGCTTTCGAGAATTCCAATGAGGAAGATTATGTCACAGAAAAGTTTTTTCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTGGGTACTCCAAATATAAAGGAGTTTGCTCCTTCTCCTGATTCATATTTGCATATCAAGGAAATTTCCGATGTCGAGTCGGTTGCCAAGTCCATGAAACACCTCGCAGAGAATCCCAAAATGTACAATCAATCACTAAGATGGAAGTACGATGGTCCATCCGATTCGTTCAAGGCCCTTGTCGATATGGCAGCAGTACACTCATCGTGTCGCCTTTGCATCCATTTGGCAACCATCATCCACGAGAAAGAAGAAACCAGTCCCGAGTTCAAGAAACGACCGTGCAAGTGCTCTCGTGGCTCCGAAACGGTTTATCATTTATACGTAAGGGAGAGAGGGCGGTTCGAAATGCAATCCATTTTCTTGAGGCTTTTCTTTGGGAAAACCAAATCATTCGGCCTCGACAATGGCAGGTCGGGAAATTTAACGTTGGAGGCCTTAGAATCGAGAGTACTCGAAAAGTTCAAGTCTTTGAAACATGTCCCAATTTGGAAGCAAGAACGACCTGAAAGCTTAAGAGGAGGAGATGAACTTAAGCTATATAGGATATATCCAGTTGGGTTGACACAGAAGCAGGCTTTATATACCTTCAGATTCAAAGGTAATGATGATTTCAAAACTCACATAGAAACACACCCTTGTGCTAAGATGGAAATCATATTTGTCTGA 1575 44.95 MGMFSKPKICRTGTTHNDSMGFNGVSPASKWKWTHFLPLFVAMVVIAEIASLSRLDIAKNAAMVDSWVDLFYGPPPLHEEIEDVSTGITIDGVMGRVNCEEWLEKVDAVEYSRDFKRKPVLVSGSEKDWKTCDVGCQFGLNPGEQPDAALGSPQQGRVASVLRSMESSHYYPENNIDLARRKGYTVVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTEPALAAAFISNCGARNFRLQALEALEKLDVKIDSYGSCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGTPNIKEFAPSPDSYLHIKEISDVESVAKSMKHLAENPKMYNQSLRWKYDGPSDSFKALVDMAAVHSSCRLCIHLATIIHEKEETSPEFKKRPCKCSRGSETVYHLYVRERGRFEMQSIFLRLFFGKTKSFGLDNGRSGNLTLEALESRVLEKFKSLKHVPIWKQERPESLRGGDELKLYRIYPVGLTQKQALYTFRFKGNDDFKTHIETHPCAKMEIIFV 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6797917 6803816 + CmoCh19G006200.1 Cmo19g00620 403780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00620 524 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 219 381 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cmo19g00620 524 Gene3D - 165 357 IPR038577 -
Cmo19g00620 524 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 33 501 - -
Cmo19g00620 524 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 33 501 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cmo19g00620 524 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 104 384 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00380 Cmo-Chr16:1749715 Cmo19g00620 Cmo-Chr19:6797917 0 wgd
Cmo19g00620 Cmo-Chr19:6797917 Cmo04g00523 Cmo-Chr4:2598170 4.98E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00620 K00753 - csv:101205170 901.353