Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00623 ATGGAGGCTCTCTCTGTTCCTCTCTCCATTATAATATCTCTCTTTCTTTTAGCTTTCTTTTCCATTTCATTTCTAAAGAGAAATGAAAAGCCAAAAGCCCAAGAAGCTCTTAAGCTTCCTCCTGGTTCTATGGGTCTGCCATGGTTTGGAGAAACTCTGCAGCTTTATTCTCAAGATCCCAACATATTTTTCTCAGAAAAACAGAGGAGATTTGGAGAGATTTTTAAGACCAATATTTTGGGATGTCCTTGTGTGATGTTGGCAAGCGCCGCCGCTGCCCGGTTTGTTTTGGTGACCAACGCCCATTTATTCCGGCCGACTTACCCTAAAAGCAAGGAGACTCTGATCGGTCCGGCGGCGCTTTTCTTCCATCAGGGTAACTACCATTCTAACCTCAGGAAGCTTGTTCAAAATTCTCTCTGTCTTGAACGCCTCAGAACTACTCTTGTTCCTCGCATTGAAGCCGCCGCCATTTCCGCCGTCGATTCTTGGGCCGCCACCGGCCATGTCGTCAATACCTTCCTTCAAATGAAAAAGTTCTCTTTCGAGGTAGCGATTGTGGCCGTGTTTGGTAAGCTAGAAACTCACTACAGCGAGAAGCTGAAAGAAAATTACTGCATATTAGACAAAGGCTACAACTCTTTTCCGACCAGACTACCAGGAACAGCATATTCAAAAGCATTATCAGCGAGGAAGAAGCTGAGAGAGATTCTGAGAGAGATAATTGAGGAGCGGAGAGAAAAAGGGGCGGCGGAGAGAGATTTTGTGGGTCAGCTTTTGAGCTACAGAGATGAAAATGGAGAGAGATTGAGTGAGGAACAGATCGCCGACAACGTCATCGGAGTTCTGTTTGCGGCACAGGACACGACGGCGAGTGTTCTGACATGGATTCTGAAGTATCTTCATGACAGTTTGAAGCTGTTTGAGGCTGTCAGGGTTGTATTAGAGAGCTTGAGGATGGCTAGCATCATATCCTTCACTTTTAGGGAGGCAGTGGTTGACGTGGAATATAAAGGGTACCTTATACCAAAGGGATGGAAGGTCATGCCCTTGTTTAGGAATATTCATCACAACCACGACTACTTCAATCATCCTCATACGTTCGATCCCTCTAGATTTGAGGTGGCTCCACGACCCAATACATTCATGCCATTTGGTAATGGAGTAAATTCTTGCCCGGGGAACGAACTTGCCAAGCTAGAGATCCTCATCTTACTTCATCACCTCGTGACCAAATTTAGTGGTGGCATCGTCGATGGTAATGACGTCGATGTTGTCGAGCTTCAAGTAAATGAGTGGACTATGTTGGTTTTTTACATAGAGGCGCCATGTCGTAGTGGGAGAAGGCTCAGAAGGAGGAGCGCGCCAGAGGCTTTACATTTTGTCATCGCCATCCAGTTCGCCTTTAGCTTCTTTGCCGCGAGAGTGAAGCTTCGTGCTTTGCACCCTACTGTCCGGATGCACTCAAATGATAAGAAGAACAAGTGGATTATAACTAGGTTTGCCATTTGGCTGTTGAGCAAAGGAGCTGCTCCACTGAAACTTGATGAGGCTACCCAGTCAAAGATTGTAAAATGTTCGGAATCAATGTGGAAACTAGCATACTATGGAACTGTTGAAATATGCGTTCTAAAAATTGCATACAACCAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATGCGGAGTTGCAACTTCCTCTAAAATTGTTGTATATGTGCCAATGTGGGTTCTACTTATATAGCATCGCTGCACTTCTTATATGGGAGACTCGGAGAAAGGATTTCTCCGTCATGATGTCTCATCATGTAATTACTGTTATCTTGATCGGATACTCATATATTACGAGATTTTTCCAGATTGGATCGGTTATTCTTGCGCTCCACGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAGAATGAACTTGGAGCAAGTGTCTTCTTTGGATGTTTTGCCATTTCATGGCTCATATTGCGTCTTATATTCTTTCCATTCTGGGTTATAAAAGCAACAAGTTATGATCTCTGTGAGTACTTGAAGCTATCAGATGTGAATTCCAGATCGATATACTATGTTTTCAACACAATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTACTCATATGCTCTATGATCAGTAGACAGCTGAAAAATAGGGGGAAAGTTGGAGAAGATATAAGATCTGATTCTGAGGACGAGGATTAG 2247 43.61 MEALSVPLSIIISLFLLAFFSISFLKRNEKPKAQEALKLPPGSMGLPWFGETLQLYSQDPNIFFSEKQRRFGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETLIGPAALFFHQGNYHSNLRKLVQNSLCLERLRTTLVPRIEAAAISAVDSWAATGHVVNTFLQMKKFSFEVAIVAVFGKLETHYSEKLKENYCILDKGYNSFPTRLPGTAYSKALSARKKLREILREIIEERREKGAAERDFVGQLLSYRDENGERLSEEQIADNVIGVLFAAQDTTASVLTWILKYLHDSLKLFEAVRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNHDYFNHPHTFDPSRFEVAPRPNTFMPFGNGVNSCPGNELAKLEILILLHHLVTKFSGGIVDGNDVDVVELQVNEWTMLVFYIEAPCRSGRRLRRRSAPEALHFVIAIQFAFSFFAARVKLRALHPTVRMHSNDKKNKWIITRFAIWLLSKGAAPLKLDEATQSKIVKCSESMWKLAYYGTVEICVLKIAYNQPWFRDSNQYFKGWPNAELQLPLKLLYMCQCGFYLYSIAALLIWETRRKDFSVMMSHHVITVILIGYSYITRFFQIGSVILALHDASDVFMEAAKVFKYSENELGASVFFGCFAISWLILRLIFFPFWVIKATSYDLCEYLKLSDVNSRSIYYVFNTMLLMLLVFHIYWWLLICSMISRQLKNRGKVGEDIRSDSEDED 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6822808 6838390 + CmoCh19G006230.1 Cmo19g00623 403783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00623 748 Pfam TLC domain 525 723 IPR006634 GO:0016021
Cmo19g00623 748 ProSiteProfiles TLC domain profile. 524 731 IPR006634 GO:0016021
Cmo19g00623 748 SUPERFAMILY Cytochrome P450 37 428 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 SMART lag1_27 524 731 IPR006634 GO:0016021
Cmo19g00623 748 PANTHER CYTOCHROME P450 26 312 421 - -
Cmo19g00623 748 PANTHER CYTOCHROME P450 26 12 312 - -
Cmo19g00623 748 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 PRINTS E-class P450 group I signature 351 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 PRINTS E-class P450 group I signature 392 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 PRINTS P450 superfamily signature 312 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 PRINTS P450 superfamily signature 383 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 Coils Coil 227 254 - -
Cmo19g00623 748 Gene3D Cytochrome P450 28 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 312 421 - -
Cmo19g00623 748 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 12 312 - -
Cmo19g00623 748 Pfam Cytochrome P450 40 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00623 748 Pfam Cytochrome P450 313 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01360 Cmo19g00623 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01361 Cmo-Chr11:9491145 Cmo19g00623 Cmo-Chr19:6822808 0 dispersed
Cmo15g00872 Cmo-Chr15:4427651 Cmo19g00623 Cmo-Chr19:6822808 4.89E-73 dispersed
Cmo16g00553 Cmo-Chr16:2690840 Cmo19g00623 Cmo-Chr19:6822808 3.53E-146 dispersed
Cmo01g01899 Cmo-Chr1:13671091 Cmo19g00623 Cmo-Chr19:6822808 0 wgd
Cmo11g01360 Cmo-Chr11:9461604 Cmo19g00623 Cmo-Chr19:6822808 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00623 K09843 - csv:101219389 662.529