Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00654 ATGACTTCATCCTCTTCCTCAGAGCATCCACCGGCTCCCCTGCCTCTGAAACCCATCCCCGGCAGCTATGGCCTCCCCTTCTTCGGACCCATCAAATCTCGCTACGATTACTTCTACTTTCAGGGGAGAGAAAAGTTCTTCCGATCTCGAATGGCCCAATACGGTTCCACCGTGTTCCGAACCAACATGCCGCCGGGCCCCTTCATCTCCTCCGATTCCAGAGTCATCGTCCTCCTCGACGCCCGGAGCTTTCCGATCCTTTTCGATACTACTAAGGTTGAGAAACGGAATGTTCTCGACGGAACTTACATGCCCTCCGTCTCCTTCACCGGCGGAATTCGCACCTGCGCTTTTTTAGACCCGTCGGAAACAGAGCACTCTGTTCTCAAACGTCACTTCCTTAAATTCCTCGCCTCTCGTCACGACAAATTCATCCCTCTGTTTCGAAACTCCGTGTCGGAGATGTTTAGTAAGCTGGAAAAGGAATTGGAAAAGAATAACGCTGCGGATTTCAACTCTGTTTCCGATGCGGCATCGTTTGACTTCATTTTCCGGTTGCTCTCCGATGGGAAACCCGATGAGAAACTCGGCTCCGATGGACACAGTTTGGTTGATCGATGGCTTATTATGCAGCTCGCTCCATTAGCCACTCTGGGTTTGCCCAAATTCCTCAGCTGCTTTGAAGATCTCATCATCCATACCTTCCCTCTGCCGTTCGCGCTCGTCAAGAACGCTTACAGGAAGCTCTACGATGCATTTTACGACTCGTCGGAGACATTTCTAAACGAAGCCGAAAAACAGGGGATAAACAGAGAGAAAGCATGTCACAATTTAGTGTTCTTGGCCGGATTCAACGCATACGCCGGAATGAAAGTGTTGTTACCAATTATACTAAACTGGGTCGGATCCGCCGGTAAGGAGCTTCACAAGAAACTCGCCGGCGAAATCAGAGCCGCCGTGAAGGAAAACAGAGGACTGACATTTACCGCCATAGAGAACATGAGTTTACTGAAATCCGTCGTGTACGAGGTTCTGAGAATCGACCCGCCGGTGCCGTACCAGTACGCGAAGGCGAAACAGGACATTATAATCGAGAGCCATGATTCGGCTTTCAAGATCAAGAAAGGGGAGATGATTTTTGGGTATCAGCCGATCGCCACTAGAGATCCGAAGGTGTTTGAGAAGCCGGAGGAGTTTATCGGCGACAGGTTCGTCGGAGAGGAAGGGGAGAAGCTTTTGAAGTATGTTTACTGGTCAAATGGCCGGGAGACGGAGGAGCCGACGGCGGAGAATAAGCAGTGCCCGGCGAGGGATCTGGTGGTGCTGGTATCCAGAGTAGTTTTGGCGGAGCTTTTCCTCCGTTACGACACGTTCGCCGTCGAGGGAACTCAGTCGTCGTTGGGTTGGTCCGTTAAGGTGAAATCGTTGACCAAAGTCTAA 1440 51.04 MTSSSSSEHPPAPLPLKPIPGSYGLPFFGPIKSRYDYFYFQGREKFFRSRMAQYGSTVFRTNMPPGPFISSDSRVIVLLDARSFPILFDTTKVEKRNVLDGTYMPSVSFTGGIRTCAFLDPSETEHSVLKRHFLKFLASRHDKFIPLFRNSVSEMFSKLEKELEKNNAADFNSVSDAASFDFIFRLLSDGKPDEKLGSDGHSLVDRWLIMQLAPLATLGLPKFLSCFEDLIIHTFPLPFALVKNAYRKLYDAFYDSSETFLNEAEKQGINREKACHNLVFLAGFNAYAGMKVLLPIILNWVGSAGKELHKKLAGEIRAAVKENRGLTFTAIENMSLLKSVVYEVLRIDPPVPYQYAKAKQDIIIESHDSAFKIKKGEMIFGYQPIATRDPKVFEKPEEFIGDRFVGEEGEKLLKYVYWSNGRETEEPTAENKQCPARDLVVLVSRVVLAELFLRYDTFAVEGTQSSLGWSVKVKSLTKV 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7035716 7037368 + CmoCh19G006540.1 Cmo19g00654 403814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00654 479 SUPERFAMILY Cytochrome P450 14 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00654 479 PANTHER CYTOCHROME P450 26 14 460 - -
Cmo19g00654 479 Pfam Cytochrome P450 306 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00654 479 PRINTS E-class P450 group IV signature 334 350 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00654 479 PRINTS E-class P450 group IV signature 371 385 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00654 479 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00654 479 PANTHER HYDROPEROXIDE LYASE 14 460 - -
Cmo19g00654 479 Gene3D Cytochrome P450 11 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01328 Cmo19g00654 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00223 Cmo-Chr5:953094 Cmo19g00654 Cmo-Chr19:7035716 2.19E-178 dispersed
Cmo19g00654 Cmo-Chr19:7035716 Cmo14g01035 Cmo-Chr14:5631574 3.00E-10 dispersed
Cmo19g00934 Cmo-Chr19:8618602 Cmo19g00654 Cmo-Chr19:7035716 6.37E-132 transposed
Cmo11g01328 Cmo-Chr11:9170165 Cmo19g00654 Cmo-Chr19:7035716 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00654 K01723 - csv:101211574 807.364