Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00725 ATGTGGCTACAGAAAGGAAACGGTGTTAATGGCGGCAAAAAGGGAGGAGCAGGCGGAGGGGGAAAGGGGTTGGTGGCTATTGCTATTAACAGGGAAAAAGGAAGCCAAAATGCTATCAGATGGGCCGCCGAGCATCTGCTCGGAAGGGGCCAAAATGTGGTATTAATCCATGTGGTTCAGAGACCTTCCAGTGCGGCTGCTTCTTTGATTGGGGAAGCCATTATTTGTAATAGTGATGGCGATTTCTCTGCTGATACCCCTCGGAAACAGCAGCTCGAGATGCAGACGAGGGACATTTTTCTCACCTTCCATTGCTATTGTACACGCAAGGATATTCAATGCCTTGATGTTATATTGGAAGACACCGATGTGGTAAAAGCATTAAATGAATACGTCTTGTATGCTGCAATCGATAACTTGGTGCTCGGGGTTCCTACGAAACATGGATTTATTAGGTTCAAGACATCGAGCGTGGGAGGTAGCGTGTCGAAAGGGGCACCAGATTTCTGCACTGTGTATGTCATCTCAAAGGGGAAGGTGTCGTCAGTGAGAAATGCATCTCGCTCAGCTCCCTCTTTTTCTCCTCTACATGAACATTTACAGAAATTATCCAAGCCGATCGTACAGGGAGCAATCACTCCTCGACATAAGTTTCTTCTAAGAGATAGGGCATCGTTCAAGCCTCGCACCATTCACGATGAATTAGTCAAGTCACCTATCTCTCACGGAGGAGAGAGAATTTCTATCACGAAATGTAGCGGAGGGTTCTTTGAGACAGAATCCGACATATCCTTTATAAGCTCTGGCAGACCAAGCATGGATCGTACTTCTGTTGCATTCGACTACTCTGATTCAGCTCCCTCGCGATTTTCAACCAGTTCAGAGAGTAGCTTTACATCTCTACCATTTCAACCAAAATGGACAGACCTCAATAATCTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACACCATGTTCCTGGTCATCTCAGAACTTGGATGAAGCAGAACTTGAAATGAAGAGGTTGAAGCTAGAGCTTAAACAAACTATGGAGATGTACAGTACAGCATGTAAAGAAGCACTAACAGCAAAGCAAAAGGCAATGGAACTGAATGATTGGAGACGTGAAGAACAACAAAAACTAGAAGAGGCACGACTTGCTCAAGAAGCAGCAATAGCTATTGCAGAGCAGGAGAGAGCGAGATGCAGAGCAGCAGTGGAAGCAGCTGATGCAGCTAAGAGAATTGCAGAGTTAGAATCACATAAAAGAGCAAATCTAGAGATGAAAGCACTTAAAGAAGCAGAGGAAATGCAGAGAGCATTGAAAAATGTTACACAAAGTGACATCAGATACAGGTTATATTCAATTGAGGAGGTTGAATTGGCAACGGAACGTTTTGCACCATCTCGGAAGATAGGAGAGGGAGGTTATGGACCTGTCTTTCGTTGTCGTCTTGATCACACATCGGTTGCGGTCAAGGTTTTGCGTCCTGATGCATCTCAAGGGAGGAGTCAGTTTCAGCAGGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTAGGAGCATGCCCGGAATATGGCATTCTAGTGTACGAGTACATGTCCAACGGAAGTTTGGAGGATCGACTCTTCCGAAAGGGGAACACCCCTGTTATTCCTTGGCAATTGAGGTTTCGAATTGCTGCTGAGATTGCTACTGGCCTTCTGTTTCTCCACCAGACAAAGCCAGAGCCATTAGTGCACCGTGACCTCAAGCCAGCTAACATATTGCTGGACCACAGCTATGTTTGCAAGATAAGCGACGTCGGTTTGGCTAGGCTTTTACCTGCCGTGGCCGAGAATGTAACACAATGTTGCATGACTTCGGCCGCTGGAACTTTCTGCTATATAGACCCTGAGTATCAACAAACTGGAATGCTTGGGGTTAAATCTGATGTGTATTCACTAGGTATCATGTTGCTTCAACTAATTACAGCCAAGCCGCCCATGGGGTTGGCTCACCAAGTCGCTCGCTCTATTGAGAAGGGGACTTTTCAGGAGTTTCTGGATCCAGCTGTGACTGATTGGCCAGTGGAACAAGCACTTTGCTTCGCTAAATTAGCACTTCAATGTGCAGAACTTAGACGAAAAGACAGACCAGATCTTTGCAGTGTTGTGCTGCCAGAACTTAACAACTTGAGAGAATTTGGTGAGAAGAATATGGAGCACATGGTGTCATGGGCTCTTAGTGGATCTTTGAGCGGTTTTAGCAATGCCTCAATGGAGCAGGATATAATGAGCGACCCGCACCTAATGATGACTTCAGAAAGTTCCAAGGGCCAGTCTAGTGCATCGTCACAGGCAGGAGGAGACTGA 2379 45.82 MWLQKGNGVNGGKKGGAGGGGKGLVAIAINREKGSQNAIRWAAEHLLGRGQNVVLIHVVQRPSSAAASLIGEAIICNSDGDFSADTPRKQQLEMQTRDIFLTFHCYCTRKDIQCLDVILEDTDVVKALNEYVLYAAIDNLVLGVPTKHGFIRFKTSSVGGSVSKGAPDFCTVYVISKGKVSSVRNASRSAPSFSPLHEHLQKLSKPIVQGAITPRHKFLLRDRASFKPRTIHDELVKSPISHGGERISITKCSGGFFETESDISFISSGRPSMDRTSVAFDYSDSAPSRFSTSSESSFTSLPFQPKWTDLNNLNDFSSVSDESCRTPCSWSSQNLDEAELEMKRLKLELKQTMEMYSTACKEALTAKQKAMELNDWRREEQQKLEEARLAQEAAIAIAEQERARCRAAVEAADAAKRIAELESHKRANLEMKALKEAEEMQRALKNVTQSDIRYRLYSIEEVELATERFAPSRKIGEGGYGPVFRCRLDHTSVAVKVLRPDASQGRSQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMSNGSLEDRLFRKGNTPVIPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHSYVCKISDVGLARLLPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPPMGLAHQVARSIEKGTFQEFLDPAVTDWPVEQALCFAKLALQCAELRRKDRPDLCSVVLPELNNLREFGEKNMEHMVSWALSGSLSGFSNASMEQDIMSDPHLMMTSESSKGQSSASSQAGGD 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7529137 7533200 - CmoCh19G007250.1 Cmo19g00725 403885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00725 792 SMART serkin_6 469 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g00725 792 Pfam Protein kinase domain 472 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g00725 792 Coils Coil 373 401 - -
Cmo19g00725 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Cmo19g00725 792 CDD STK_N 24 178 - -
Cmo19g00725 792 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 26 175 - -
Cmo19g00725 792 Gene3D Transferase(Phosphotransferase) domain 1 542 749 - -
Cmo19g00725 792 PANTHER OS02G0152300 PROTEIN 21 771 - -
Cmo19g00725 792 SUPERFAMILY Protein kinase-like (PK-like) 450 727 IPR011009 -
Cmo19g00725 792 Gene3D Phosphorylase Kinase; domain 1 446 541 - -
Cmo19g00725 792 Coils Coil 426 446 - -
Cmo19g00725 792 ProSiteProfiles Protein kinase domain profile. 469 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g00725 792 Gene3D HUPs 24 175 IPR014729 -
Cmo19g00725 792 Coils Coil 328 355 - -
Cmo19g00725 792 PANTHER BNAA05G18880D PROTEIN 21 771 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g00230 Cmo-Chr12:1521191 Cmo19g00725 Cmo-Chr19:7529137 0 dispersed
Cmo12g00590 Cmo-Chr12:3618660 Cmo19g00725 Cmo-Chr19:7529137 0 dispersed
Cmo12g00936 Cmo-Chr12:8699795 Cmo19g00725 Cmo-Chr19:7529137 0 dispersed
Cmo11g01716 Cmo-Chr11:12161082 Cmo19g00725 Cmo-Chr19:7529137 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75105 PF00069 Pkinase 5.70E-41 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00725 - - cmax:111468498 1379.77