Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00763 ATGTTATCGGAGTTCATGGATTTCTTGAGGGCTTGTTTCCGACCGAGCTCCGATCGGTACGTGGCGGGGGATATCAAGGGGAGGCAGGACGGGCTGCTATGGTACAAAGATAGTGGACAACATTTGAATGGTGAGTTTTCAATGTCTGTGGTTCAAGCCAACAATTTGCTTGAAGATCAGAGCCAGGTTGAGTCAGGCAGTTTGAGCACACACGAGTCTGGCCCCAGAGGAACGTTTGTTGGTGTGTATGATGGCCATGGAGGCCCCGAGACTTCTCGGTATATCTGTGATCATCTCTTCCAGCATCTCAAGAGGTTTACTTCTGAGCAAGATTCAATGTCTGCGGATGTAATACGCAAGGCATTCCAAGCGACAGAAGATGGTTTTCTTTCAATAGTTCAAAGGCAATGGTCAACAAATCCTCAAATTGCAGCTGTTGGTTCATGCTGTCTAGTTGGTGTAATCTGTGATGGGACTCTCTATGTTGCAAATCTAGGTGATTCACGTGCTGTTTTGGGTAGAGTAGTGAAGGCGACTGGGGAGGTTCTCGCCGTTCAGTTATCGACAGAGCACAATGTTTCTAATGAGTCGGTGAGGCAAGAGCTGCAATCTTTACACCCTGAAGACTCAAAGATTGTGGTTCTAAAGCATAATGTTTGGCGAGTGAAGGGCATAATACAGATCTCCAGATCCATAGGCGATGTGTACTTGAAAAAAGCCGAGTTCAATAAAGAACCTCTGTATTTAAAGTTTCGAGTTCGGGAGCCCTTCATAAAGCCAATTTTGAGCTCTGAACCAGCCATTTCTGAGACCCAGTTGAAGCCAGATGATCAATTTATTATATTTGCATCAGATGGGTTGTGGGAGCACCTTAGCAACCAGGAAGCAGTCGATATAGTTCATAGCCATTCTCAAAGTGGAAGTGCAAGAAGACTGGTCAGAGCTGCTCTCCAACTAGCTGCAAAGAAAAGAGAAATGAGGTACTCAGATTTGAAGAAGATTGACCGGGGTGTTCGTCGCCATTTCCACGACGACATCACCGTGGTGGTTGTGTTTCTCGATACAAATCTGCTCTTCAAAGCCAGTAACACAAAGAGCTCGAGTGTCTCGCTACGAGGGGGTGGAGTCAACCGCCTTCCTAACTCTCTAGTCAAAACACCCAAGTAG 1167 46.27 MLSEFMDFLRACFRPSSDRYVAGDIKGRQDGLLWYKDSGQHLNGEFSMSVVQANNLLEDQSQVESGSLSTHESGPRGTFVGVYDGHGGPETSRYICDHLFQHLKRFTSEQDSMSADVIRKAFQATEDGFLSIVQRQWSTNPQIAAVGSCCLVGVICDGTLYVANLGDSRAVLGRVVKATGEVLAVQLSTEHNVSNESVRQELQSLHPEDSKIVVLKHNVWRVKGIIQISRSIGDVYLKKAEFNKEPLYLKFRVREPFIKPILSSEPAISETQLKPDDQFIIFASDGLWEHLSNQEAVDIVHSHSQSGSARRLVRAALQLAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDTNLLFKASNTKSSSVSLRGGGVNRLPNSLVKTPK 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7736007 7740348 + CmoCh19G007630.1 Cmo19g00763 403923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00763 388 PANTHER ALPHABET, ISOFORM E-RELATED 5 379 - -
Cmo19g00763 388 SUPERFAMILY PP2C-like 49 354 IPR036457 -
Cmo19g00763 388 ProSiteProfiles PPM-type phosphatase domain profile. 45 353 IPR001932 -
Cmo19g00763 388 Pfam Protein phosphatase 2C 71 320 IPR001932 -
Cmo19g00763 388 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 379 - -
Cmo19g00763 388 Gene3D - 34 364 IPR036457 -
Cmo19g00763 388 CDD PP2Cc 46 353 IPR001932 -
Cmo19g00763 388 SMART PP2C_4 37 351 IPR001932 -
Cmo19g00763 388 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo19g00763 Cmo20g00737 CCT
Cmo02g00266 Cmo19g00763 CCT
Cmo11g01752 Cmo19g00763 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g01301 Cmo-Chr16:9262899 Cmo19g00763 Cmo-Chr19:7736007 0 dispersed
Cmo19g00763 Cmo-Chr19:7736007 Cmo07g00399 Cmo-Chr7:1819193 0 dispersed
Cmo11g01752 Cmo-Chr11:12348584 Cmo19g00763 Cmo-Chr19:7736007 0 wgd
Cmo19g00763 Cmo-Chr19:7736007 Cmo02g00266 Cmo-Chr2:1281411 0 wgd
Cmo19g00763 Cmo-Chr19:7736007 Cmo20g00737 Cmo-Chr20:3678588 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00763 - - csv:101211601 681.789