Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo19g00765 | ATGGGTATGGAACAAAACAATCATGATGCAGAGGAGGGAACGCTGGAGATTGGCATGGAATATAGAACAGTCTCGGGAGTTGCTGGTCCTTTGGTTATTCTGGACAAAGTCAAGGGACCTAAGTTTCAGGAGATTGTTAATATTCGTCTCGGAGATGGATCAACCAGGCGTGGTCAAGTCCTGGAAGTTGATGGGGAGAAAGCTGTTGTTCAGGTATTTGAAGGGACATCTGGAATTGATAACAAATATACAACTGTGCAATTTACTGGAGAGGTTTTGAAAACTCCAGTCTCTTTGGACATGCTCGGTCGAATTTTTAATGGTTCTGGAAAACCCATTGATAATGGTCCTCCTATCTTGCCTGAGGCTTATTTGGACATTTCTGGGAGTTCTATAAACCCTAGTGAGAGAACTTATCCTGAAGAGATGATACAGACTGGGATTTCTACAATTGATGTCATGAATTCCATTGCTAGAGGACAAAAGATCCCTCTTTTCTCAGCTGCAGGTCTTCCTCACAATGAAATTGCTGCCCAGATATGCCGTCAGGCTGGCTTGGTAAAGCGGTTGGAGAAATCCAACGATCTTCTCGAGGGTGGTGAAGAGGACAACTTTGCCATTGTTTTTGCCGCTATGGGTGTTAACATGGAGACAGCTCAATTTTTCAAACGTGATTTTGAGGAAAATGGTTCTATGGAGAGAGTGACCCTATTTCTGAACCTGGCTAATGACCCTACTATCGAGCGTATTATCACTCCTCGTATTGCTCTTACCACCGCTGAATATTTGGCTTATGAATGCGGGAAGCATGTTCTCGTCATATTGACAGACATGAGTTCTTATGCGGATGCCCTTCGAGAGGTGTCTGCAGCACGAGAGGAAGTGCCTGGAAGGCGTGGATATCCTGGTTATATGTATACTGATCTTGCTACAATCTATGAGCGAGCTGGACGTATTGAAGGACGTAAAGGATCCATTACTCAAATTCCAATCCTCACTATGCCAAACGATGATATTACACATCCGACTCCCGATCTTACTGGCTATATTACCGAGGGACAGATCTACATCGATAGGCAGCTCTACAACAGACAGATATACCCACCAATCAATGTCCTTCCTTCATTGTCTCGTCTTATGAAGAGTGCCATTGGTGAGGGAATGACCCGTAGGGATCATGCTGATGTATCCAACCAGCTCTATGCAAATTATGCAATTGGGAAGGATGTTCAGGCAATGAAAGCCGTGGTTGGAGAAGAAGCACTCTCTTCTGAGGATCTGCTCTATTTGGAGTTTTTGGACAAATTTGAGAGGAAGTTTGTCTCTCAAGGAGCTTACGATACTCGAAATATTTTCCAATCGCTTGATCTGGCATGGACACTGCTTCGTATTTTCCCTCGCGAACTTCTGCACCGTATACCTGCAAAGACTCTTGATCTGTTTTACAGCCGAGAATCTGCAAATTAA | 1467 | 44.04 | MGMEQNNHDAEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSNDLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVSQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDLFYSRESAN | 488 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 7744068 | 7748734 | + | CmoCh19G007650.1 | Cmo19g00765 | 403925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo19g00765 | 488 | CDD | V_A-ATPase_B | 92 | 379 | - | - | |
Cmo19g00765 | 488 | CDD | ATP-synt_V_A-type_beta_N | 20 | 91 | - | - | |
Cmo19g00765 | 488 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 94 | 383 | IPR027417 | - | |
Cmo19g00765 | 488 | ProSitePatterns | ATP synthase alpha and beta subunits signature. | 368 | 377 | IPR020003 | GO:0005524 | |
Cmo19g00765 | 488 | TIGRFAM | V-ATPase_V1_B: V-type ATPase, B subunit | 20 | 487 | IPR005723 | GO:0033180|GO:0046961|GO:1902600 | |
Cmo19g00765 | 488 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B1-RELATED | 3 | 488 | - | - | |
Cmo19g00765 | 488 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 147 | 377 | IPR000194 | GO:0005524 | |
Cmo19g00765 | 488 | Hamap | V-type ATP synthase beta chain [atpB]. | 18 | 486 | IPR022879 | - | |
Cmo19g00765 | 488 | Pfam | ATP synthase alpha/beta family, beta-barrel domain | 24 | 90 | IPR004100 | GO:0046034|GO:1902600 | |
Cmo19g00765 | 488 | CDD | ATP-synt_V_A-type_beta_C | 387 | 481 | - | - | |
Cmo19g00765 | 488 | Gene3D | - | 29 | 488 | - | - | |
Cmo19g00765 | 488 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B | 3 | 488 | IPR022879 | - | |
Cmo19g00765 | 488 | PIRSF | V-ATPsynth_beta/V-ATPase_B | 11 | 488 | IPR022879 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo11g01753 | Cmo19g00765 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo19g00765 | Cmo-Chr19:7744068 | Cmo07g00595 | Cmo-Chr7:2676525 | 5.41E-25 | dispersed | |
Cmo11g01753 | Cmo-Chr11:12355259 | Cmo19g00765 | Cmo-Chr19:7744068 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo19g00765 | K02147 | - | csv:101211838 | 961.829 |