Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00771 ATGGTTATGGAGGATAACGAGAGCTGTGGAAGTAGAGCACATGACTCGTTGTCGCCGGCGCAGAGTCGGCAACAGAGACAGAAGTTTGAGGTCTACAATGAGGTTCTACGGCGTTTGAAGGATTTAAACAACGAGGAGGCTAATCAGCCTGGTTTTGACGACGAACTATGGGTTCACTTCAATCGTCTTCCCACTCGATATGCTCTAGACGTAAATGTGGAGAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATTTGCTCATGATCCTGCAAATCGACCTGCAATTGAAGTCCGCCTAGTGCAGGTCCAGGCCATTTCTGATGGGAATTCCGCTGACTTTGCTGATTCATGTTCTGTAAAAGACACTGACCATAATTCTGCAAATTGCTTGAGTAAACAGAGCATACATCCACCCCCTGCCTTTGGGTCATCTCCCAACCTTGAGGCCTTGGCCCTTGAAGCTAATAACGCTCAGGATCTGGAGGTTGATCATTCTGTACATGCCAGAACACAGTTTTCCCGGCCGATGCATGAAATAACTTTCTCTGCAGATGATAAGCCGAAACTTCTCAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAGGAGGCACATGCATTTTCCACTGTTGACGGTTACTCATTGGACGTTTTTGTAGTTGATGGGTGGCCCTATGAGGAAACAGAACGATTGAAGACTGCATTAGAGAAGGAAGTCTCGCAGGTTGAGAAGCGGGCTTGGCCAAATCATAAATCCTCGTCACCTGTTGGGGGACAAGATTTAACAACTAAATGTGAGCCTGATCGGGTGGAAATTCCCACAGATGGGACTGATGTATGGGAAATTAATCCTAGACATTTGAAGTTCGAGCATAAAGTTGCGTCAGGTTCATATGGGGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTGGCTATTAAAGTTCTCAAAACTGAACGTGTAAATTCAGATATGCAAAGTGAGTTTGCCCAGGAGGTATATATTATGAGAAAAGTCAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGTACGAAGCCCCCAAGCTTGTGCATTGTTACAGAGTTTATGTCTGGTGGTAGTGTATATGATTATCTACATAAACAAAAGGGAACCTTTAGGCTTCCAACTTTGCTCAAGGTAGCCATCGATGTCTCCAAGGGAATGAACTATTTGCACCAAAATAATATTATTCACAGAGATCTTAAGGCTGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGTGTTGCCAGAGTGAAAGCTCAATCAGGAGTTATGACCGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTTGGAATTGTCTTGTGGGAGCTGCTAACTGGAAAGCTACCTTATGAATTCCTAACCCCATTACAAGCCGCAGTTGGAGTGGTTCAAAAGGGTTTACGACCTACTATTCCTAAGCACACTAATCCCAAGCTGGCTGAGTTGCTAGAAAAATGTTGGCAGCAAGATCCATCATTGAGGCCCGACTTCTGTGAAATTATCGACATATTGTTGCAGATAACTAAGGAAGTCGCTGATGACGGTGACGAACGTCGAAAGGAGAAGAGTGGAGGGTTCCTTTCAGTGTTGAGACGAAACCTTCACTGA 1722 44.48 MVMEDNESCGSRAHDSLSPAQSRQQRQKFEVYNEVLRRLKDLNNEEANQPGFDDELWVHFNRLPTRYALDVNVERAEDVLMHKRLLQFAHDPANRPAIEVRLVQVQAISDGNSADFADSCSVKDTDHNSANCLSKQSIHPPPAFGSSPNLEALALEANNAQDLEVDHSVHARTQFSRPMHEITFSADDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETERLKTALEKEVSQVEKRAWPNHKSSSPVGGQDLTTKCEPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKTERVNSDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPTLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLAELLEKCWQQDPSLRPDFCEIIDILLQITKEVADDGDERRKEKSGGFLSVLRRNLH 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7783849 7792722 - CmoCh19G007710.1 Cmo19g00771 403931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00771 573 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 15 555 - -
Cmo19g00771 573 Coils Coil 565 573 - -
Cmo19g00771 573 ProSiteProfiles Protein kinase domain profile. 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g00771 573 SUPERFAMILY ACT-like 179 247 IPR045865 -
Cmo19g00771 573 CDD STKc_MAP3K-like 299 542 - -
Cmo19g00771 573 MobiDBLite consensus disorder prediction 251 270 - -
Cmo19g00771 573 PRINTS Tyrosine kinase catalytic domain signature 367 380 IPR001245 GO:0004672|GO:0006468
Cmo19g00771 573 PRINTS Tyrosine kinase catalytic domain signature 404 422 IPR001245 GO:0004672|GO:0006468
Cmo19g00771 573 PRINTS Tyrosine kinase catalytic domain signature 450 460 IPR001245 GO:0004672|GO:0006468
Cmo19g00771 573 PRINTS Tyrosine kinase catalytic domain signature 469 491 IPR001245 GO:0004672|GO:0006468
Cmo19g00771 573 PRINTS Tyrosine kinase catalytic domain signature 513 535 IPR001245 GO:0004672|GO:0006468
Cmo19g00771 573 Gene3D Phosphorylase Kinase; domain 1 283 371 - -
Cmo19g00771 573 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 555 - -
Cmo19g00771 573 SMART serkin_6 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g00771 573 Pfam Protein tyrosine and serine/threonine kinase 293 541 IPR001245 GO:0004672|GO:0006468
Cmo19g00771 573 CDD ACT_TyrKc 179 245 - -
Cmo19g00771 573 Coils Coil 231 251 - -
Cmo19g00771 573 MobiDBLite consensus disorder prediction 1 26 - -
Cmo19g00771 573 ProSiteProfiles ACT domain profile. 181 253 IPR002912 -
Cmo19g00771 573 MobiDBLite consensus disorder prediction 12 26 - -
Cmo19g00771 573 SUPERFAMILY Protein kinase-like (PK-like) 279 542 IPR011009 -
Cmo19g00771 573 Gene3D Transferase(Phosphotransferase) domain 1 372 564 - -
Cmo19g00771 573 MobiDBLite consensus disorder prediction 252 266 - -
Cmo19g00771 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01758 Cmo19g00771 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00728 Cmo-Chr2:4594979 Cmo19g00771 Cmo-Chr19:7783849 5.62E-22 dispersed
Cmo04g02557 Cmo-Chr4:18735020 Cmo19g00771 Cmo-Chr19:7783849 3.06E-166 dispersed
Cmo06g00132 Cmo-Chr6:722214 Cmo19g00771 Cmo-Chr19:7783849 0 dispersed
Cmo15g00611 Cmo-Chr15:2962529 Cmo19g00771 Cmo-Chr19:7783849 2.72E-49 dispersed
Cmo16g01308 Cmo-Chr16:9294327 Cmo19g00771 Cmo-Chr19:7783849 1.82E-33 dispersed
Cmo19g00771 Cmo-Chr19:7783849 Cmo12g00939 Cmo-Chr12:8727422 2.19E-86 dispersed
Cmo01g02053 Cmo-Chr1:14343989 Cmo19g00771 Cmo-Chr19:7783849 3.82E-57 transposed
Cmo01g02052 Cmo-Chr1:14338856 Cmo19g00771 Cmo-Chr19:7783849 2.51E-40 wgd
Cmo11g01758 Cmo-Chr11:12398386 Cmo19g00771 Cmo-Chr19:7783849 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75106 PF07714 PK_Tyr_Ser-Thr 2.20E-74 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00771 - - csv:101213048 1080.86