Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00850 ATGAAACAACCAACACATCCTTCAGCTACTGTCCTTCTTCTTCTTCTCTCTTCTTTGCTGCTCACTCCCACCGCCGCCATTAAAAGGTCCTATGTCGTCTACATGGGAGCTCATTCCCACGGCGGTCGGAAACCCGCCAACATCGTCGCCGATTCTCACCGTGACCTCCTCCGACCATATCTCGAGAGTGGAAATGAATTCGCCGAAGATGTCATCTTTTACTCGTACACTAGACATATCAATGGCTTTGCAGCAATGTTGGAAGACCAAGTAGCTGCTCGATTAGCTCAGCACCCGGAAGTGGTGTCGGTTTTTCCGAACCGAGGAAGACGGTTACACACGACACGATCATGGGAGTTCATGGAATTGGAGAACAATCATGGAGTTATAAGTTCAGAATCAATATGGAAGAAGGCAAGGTTTGGAGAAGACACCATTATTGGAAACCTTGATACTGGGGTATGGCCGGAATCAAAGAGCTTTAGTGATTACGATGATTTGGGACCAATTCCCCAAAGGTGGAGAGGAATATGCCAAAACCAAAACGATCCTTCCTTCCATTGCAATAGGAAACTAATCGGAGCAAGATACTTCAACAAAGGCTACAAATCCGTTGTCGGTCATCTAAATTCTTCGTTCAATTCGCCGAGGGATAACGAAGGGCATGGTTCTCATACCTTATCGACGGCGGGCGGTAACTTCGTCGCCGGAGCTAGTGTTTTCGGCTTGGGAAAGGGCATTGCCAAGGGCGGATCTCCTAGGGCTCGGGTGGCCGCTTACAAGGTCTGCTGGCCTCCAGCGGCTGGGAATGAGTGCTTCGATGCCGATATATTGGCGGCGTTTGATGTGGCGATCCACGATGGCGTCGATGTGTTGTCGGTGTCGCTTGGAGGAGATCCGAATCCGTTGTTTAACGATAGTGTTGCGATTGGATCATTCCACGCCGTGAAGCACGGGATTGTGGTGATTTGCTCTGCCGGAAATTCGGGACCAACAGCCGGTTCCGTGACGAATATTGCGCCCTGGCAGATCACCGTCGGAGCCAGTACCATGGACAGGAAGTTCCCTAGTCGTGTCGTTCTTGGGAACAAGAAGCAGATTGAGGGCGAAAGCCTAACCCCTGAAGGTTTGCCAAGCAGGAAGTTCTATCCACTCATGAGTGCTGCAAATGTTAGATTGGCCAATGCATCAGCTCATGAAGCTCAATTGTGTAAAGCTGGTACGCTTGATCCTAAGAAGGCGAAGGGAAAGATCCTTGTCTGCCTTCGTGGTGATAATGCAAGAGTGGACAAGGGCGAGCAAGCAATGTTGGCTGGTGCTGTGGGTATGATTCTCGCCAACAATGAGCTCAGTGGGAACGAAATCCTTGCTGACCCACATGTTCTTCCAGCCTCGCACATCAACTTCACTGATGGCGTTGCAGTTTTTGCATACGTCAATTCAACCAAGTTCCCTCAGGCTTACATCACAGGAGCTACAACTCAATTAGGTATAAGGCCAGCTCCATTTATGGCAGCATTTTCATCAGTTGGACCAAGCACTATTACTCCAGAGATCTTAAAGCCTGATGTTACAGCACCTGGGCTGAGTGTTATAGCTGCTTATACTGGAGCAGAAGGACCTACCAATCAAGAATATGATAAGCGTCGGGTTGCTTTTAACTCGGTATCAGGAACTTCCATGTCATGCCCTCATGTTTCTGGTATAGCTGGTCTCCTTAGAACTCTTTACCCTCACTGGAGTCCTGCCGCTATTAAATCTGCAATCGTCACCACGGCAAGCACCTTAGACAACAACTTCAAGCCGCTCCTCAACGCGTCCTACTCTGTGGCCACGCCATTCAACTATGGAGCAGGACACATTCATCCAAATAGAGCTACAGATCCTGGCTTGGTCTATGACATAACGGTTAATGAATATCTGTCATTTCTATGTGCCTTAGGATACAACAAAGCTCAACTATCACAGTTCTCCAATGGCCCCTTCAATTGCTCGGAGCCTATTAGTCTTACAAATCTCAACTATCCTTCAATCACTGTCCCTAACCTCTCGAGATCGATCACAATTACTCGAAGACTAAAAAATGTCGGTTCCCCCGGAACGTACAAAGCCAAGATAAGAAAACCGGCTGGGATATCGGTTTCGGTTAAGCCAAAGAAGTTGAGCTTCACAAGATTAGGTGAAGAGCTGAGCTTCAAAGTTCTCATGAAAGTCAAGGAAGGGAATGTAGGAAGGAAGAAGAATTATGTATATGGTGATTTGATATGGTCTGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAATGGCAGTCTAG 2319 47.87 MKQPTHPSATVLLLLLSSLLLTPTAAIKRSYVVYMGAHSHGGRKPANIVADSHRDLLRPYLESGNEFAEDVIFYSYTRHINGFAAMLEDQVAARLAQHPEVVSVFPNRGRRLHTTRSWEFMELENNHGVISSESIWKKARFGEDTIIGNLDTGVWPESKSFSDYDDLGPIPQRWRGICQNQNDPSFHCNRKLIGARYFNKGYKSVVGHLNSSFNSPRDNEGHGSHTLSTAGGNFVAGASVFGLGKGIAKGGSPRARVAAYKVCWPPAAGNECFDADILAAFDVAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAVKHGIVVICSAGNSGPTAGSVTNIAPWQITVGASTMDRKFPSRVVLGNKKQIEGESLTPEGLPSRKFYPLMSAANVRLANASAHEAQLCKAGTLDPKKAKGKILVCLRGDNARVDKGEQAMLAGAVGMILANNELSGNEILADPHVLPASHINFTDGVAVFAYVNSTKFPQAYITGATTQLGIRPAPFMAAFSSVGPSTITPEILKPDVTAPGLSVIAAYTGAEGPTNQEYDKRRVAFNSVSGTSMSCPHVSGIAGLLRTLYPHWSPAAIKSAIVTTASTLDNNFKPLLNASYSVATPFNYGAGHIHPNRATDPGLVYDITVNEYLSFLCALGYNKAQLSQFSNGPFNCSEPISLTNLNYPSITVPNLSRSITITRRLKNVGSPGTYKAKIRKPAGISVSVKPKKLSFTRLGEELSFKVLMKVKEGNVGRKKNYVYGDLIWSDGKHHVRSPIVVMAV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8248897 8256319 - CmoCh19G008500.1 Cmo19g00850 404010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00850 772 Gene3D - 644 771 - -
Cmo19g00850 772 Pfam PA domain 402 473 IPR003137 -
Cmo19g00850 772 Gene3D - 352 496 - -
Cmo19g00850 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Cmo19g00850 772 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Cmo19g00850 772 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Cmo19g00850 772 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Cmo19g00850 772 CDD PA_subtilisin_like 359 489 - -
Cmo19g00850 772 Pfam Fibronectin type-III domain 672 769 IPR041469 -
Cmo19g00850 772 Gene3D Peptidase S8/S53 domain 144 640 IPR036852 GO:0004252|GO:0006508
Cmo19g00850 772 Pfam Peptidase inhibitor I9 30 113 IPR010259 -
Cmo19g00850 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 16 771 - -
Cmo19g00850 772 ProSiteProfiles Serine proteases, subtilase domain profile. 117 627 - -
Cmo19g00850 772 PANTHER PEPTIDASE S8 16 771 - -
Cmo19g00850 772 SUPERFAMILY Subtilisin-like 128 631 IPR036852 GO:0004252|GO:0006508
Cmo19g00850 772 CDD Peptidases_S8_3 112 594 IPR034197 -
Cmo19g00850 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Cmo19g00850 772 SUPERFAMILY PA domain 411 498 IPR046450 -
Cmo19g00850 772 Pfam Subtilase family 142 599 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00148 Cmo-Chr7:816489 Cmo19g00850 Cmo-Chr19:8248897 1.78E-178 dispersed
Cmo13g00358 Cmo-Chr13:4600597 Cmo19g00850 Cmo-Chr19:8248897 0 dispersed
Cmo13g00363 Cmo-Chr13:4656593 Cmo19g00850 Cmo-Chr19:8248897 0 dispersed
Cmo19g00850 Cmo-Chr19:8248897 Cmo16g01043 Cmo-Chr16:7274088 0 dispersed
Cmo19g00850 Cmo-Chr19:8248897 Cmo16g01017 Cmo-Chr16:7020890 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00850 - - csv:101212884 1352.04