Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00886 ATGCTTCTTTCTCCGGGTCGTTCTCCCCGGCATATCTCATCCCCTTCGCCGTCGACGGTTTCCGAGAATTCGATCCAGAATCCGCGGAGTTCGTCTTCGATTACGCCTCAGAGCTCTAGGAAACATCCCGAGGTTCTTGACGAGGATACTTATGTGGAAGCGATTGAGAAGATTATTGAGCGTGATTACTTTCCCGACATTTCGAAACTCAGAGATCGTATGGATTGGCTTGAAGCGATTAAAAGTGGAGATCCGATTCTAATTCGAGATGCGCAGTTGAAGATCATGGAGCGTCGTGGCCAGAAGGTCAAACGTTTGAATCCTGATGGTAAGTCCCGAACACCTGGTTCCACTTTTATGAGAAATTTTACTCCGTTTGATGAATTTGAGGGCAAAACACCGAAAACCCCCGGCGTTGGCGGAAGTGGAATTTCTGGTGAAACGGAGGAGGGTGATTGTAACGGCAAGGTGATGGATGAATCGCTGTCGCTTGATGAGTTTTTTAGGCAATATACGAGCCAGGATAATTTAAGTTTTTCAAAAATTCTGGACAAAGATAATAGGAAGAGGAAGGAGAGATACGCGTATTTGACGGAGGGTGAGAAGGAGGATGTGAAATCAATTGAGGATGTAAAGAGAGATAGAATAACCGATGGTTATGGGACCTCCGATCAGCCGCCGAGTACCTTGGAAGGATGGAACTACACTGCAAAAAATTTGTTGATGTATCATCCTTCCGATAGAGGTGAGGCTCCACTGACAGATGAAGAAAGGGCTGTTAGATTGAAGGGCTTAACCAAAGAAATTAGCCGAGCAAGCACTCGGTTCCATGGTAAATTGATCGATGCGAGACCAAAAGACGATGGTACAGTTGAAGTGCTCTATACCCCTGTGGCTGGAACTACCCCACATCCTGTGATGGATCGAGATGGGGATCGATTGAAGAAGTACGATTTGGGGGATTTAAGGAAGACCCCAAATCCATTTTATATAGAATCGGGGAAGAAGGCTGAGAATGGCTACAGTTTTGTCCGTACACCGTCCCCTGCCCCTGGTGTTGATGAATCTCCATTTATTACATGGGGTGAAATTGAAGGTACACCCTTAAGACTAGATCCTGAGGAGACGCCTATCGACATCGGTGGTACTGTTGATGGGCCACGATTTAATATTCCATGTCCACCTGCTCGAGATCAGAAGGCTCATTCACTCTCAAGGGAGGCTGCACGAAAGCTAAGGGAGAAATCAAAGATGTTTCAGAAGCCACCATTGCCATCACCTGTTAGAGGAGGAAGTGCTAGCCCAAGTGTTCGAAGGACGCTCTCTCCAGCCGCCCAGAAGTTTGTAAGGAATGCAATTGCCAAGTCGTCATCTTCATTTGATGAAACCCTCCGTGCCAGTTACCGAGGTGGAAGCCCGAGTTCTGCAACGCCTAAAAGTGGGAGAAGTTTGTCTAGGTTTGCTAGAGATGGGAGCTTTGGCTCAAGGTCACCTTCTGTTAAAGAAGATTCTAATCATGCTTGGTTCCTAAACTTCTTGGATATTTCAAAGCTGATGAACCGCCCATTTGATAATCATGGAGTCTTAAAATATGGCTCCTATGATGCCGTGGCTATCACTTCTGCACTTAATTTCTCGAACTTAACAAAAGCAAGCCTTGGGATTGAGAAACATGCTGCGGGGAAGCAAGCGCCGCCCTCTTTCCAAGGCATTTTCCCAAGCCGTGCCGTCTTGGGTTGTGGTTCCCCGTCAGATCTGATTCACCTACTCAAATGCAAAAAAACAATATAA 1791 46.45 MLLSPGRSPRHISSPSPSTVSENSIQNPRSSSSITPQSSRKHPEVLDEDTYVEAIEKIIERDYFPDISKLRDRMDWLEAIKSGDPILIRDAQLKIMERRGQKVKRLNPDGKSRTPGSTFMRNFTPFDEFEGKTPKTPGVGGSGISGETEEGDCNGKVMDESLSLDEFFRQYTSQDNLSFSKILDKDNRKRKERYAYLTEGEKEDVKSIEDVKRDRITDGYGTSDQPPSTLEGWNYTAKNLLMYHPSDRGEAPLTDEERAVRLKGLTKEISRASTRFHGKLIDARPKDDGTVEVLYTPVAGTTPHPVMDRDGDRLKKYDLGDLRKTPNPFYIESGKKAENGYSFVRTPSPAPGVDESPFITWGEIEGTPLRLDPEETPIDIGGTVDGPRFNIPCPPARDQKAHSLSREAARKLREKSKMFQKPPLPSPVRGGSASPSVRRTLSPAAQKFVRNAIAKSSSSFDETLRASYRGGSPSSATPKSGRSLSRFARDGSFGSRSPSVKEDSNHAWFLNFLDISKLMNRPFDNHGVLKYGSYDAVAITSALNFSNLTKASLGIEKHAAGKQAPPSFQGIFPSRAVLGCGSPSDLIHLLKCKKTI 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8428070 8430289 + CmoCh19G008860.1 Cmo19g00886 404046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00886 596 PANTHER BNAA05G29860D PROTEIN 1 498 - -
Cmo19g00886 596 PANTHER ES-2 PROTEIN - RELATED 1 498 IPR019148 -
Cmo19g00886 596 MobiDBLite consensus disorder prediction 413 438 - -
Cmo19g00886 596 MobiDBLite consensus disorder prediction 1 47 - -
Cmo19g00886 596 Pfam Nuclear protein Es2 43 448 IPR019148 -
Cmo19g00886 596 MobiDBLite consensus disorder prediction 9 40 - -
Cmo19g00886 596 MobiDBLite consensus disorder prediction 465 482 - -
Cmo19g00886 596 MobiDBLite consensus disorder prediction 465 502 - -
Cmo19g00886 596 MobiDBLite consensus disorder prediction 105 153 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00223 Cmo19g00886 CCT
Cmo19g00886 Cmo20g00670 CCT
Cmo02g00223 Cmo19g00886 ECH
Cmo19g00886 Cmo20g00670 ECH
Cmo11g01840 Cmo19g00886 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01840 Cmo-Chr11:12843736 Cmo19g00886 Cmo-Chr19:8428070 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00886 K13118 - csv:101212240 922.154