Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00929 ATGTCTGCAAAGCAACGATCAAACATTTCTCCATATTTTATCAATGAGCTTCTTCATGTAAACTTTCAGAGTATGCAGAGATTGGGGGATCCAGTGCTAAAGCCTTTCCTTCAGGATGTTGTGCAGTTTGTACCTCTTACCCAGACCCTAGGTCTAGTTATGTTAACTAAACCTCAACTTCTTCCATCAATATTCGAACAGGTTGGCATCCCAGTGTTGCTCGACTGGGCTGGACATTTCGGCATGCTTGGCTACTACACGATTCTCTCGACATTTGTCGATCCGATTATAAGCGACAGAGTGATAAATGAAGAAATCGAAGAAATCGTAGAGAAGGGTCGGAAGTTTGGTGGTCTATCTGTGGATATTTCAGCCATGACCTCTGTTCATTTCAGATCCCACAATCTCTTGCCTGCGAACCCAATTGGAAGATCGTTTTTGCATACACCAACGGCTGCTAAGAACCCCAGAATTCAAGCTAATATAAAAACCCAGTTCACCTCTTCTAGAACCCAGAGGATAATGGAGGGCATATCAGTTTCAGGGGAAGTTGGTGGTGCTGGTGGGGCATACTCATACAATGCTTTGAAGAGGTTGGATCAAATTTGGTCCAGAATTTGCTCTGGCCAAGAAGCTCCTGAAGCCGCACAGGAAGTCGTCCGTCGTCTCTCTGGTGCGTTTAGCCGTTCCGATTCGGGAGAGAAAGCCACCGACACATTTGATGTGTTGGTTTGTGGAGGTACTTTGGGAGTGTTCATAGCCACAGCTTTAAGTCTGAAGGGTCTTCGTGTCGGTATAGTGGAAAGAAATGTTCTGAAAGGGAGGGAACAAGAATGGAACATTTCAAGGAAAGAGCTGATAGAACTCGTTGAAGTTGGAGTATTAACAGAAGATGACATTGAACAAGCTACTGCTATGAAGTTTAATCCTAACAGATGTGCATTCGAAGGGAAAGGCGAAATCTGGGTTGAAGACATCCTCAATCTTGGTATCTCGCCTGAGAAGCTTATAGAGATCGTGAAGAAACGTTTCATTTCTCTAGGTGGAGTCATCTTTGAGGGATGCAACGTTTTAAGCCTTTGCATATACGATGATATGACTGTGATGCAACTCTCTGATGGGAACATTTTATCTTCTCAACTCACAATTGATGCAATGGGGAATTTTTCACCTGTGGTGAAACAGATAAGACGTGGGAGGAAGCCTGATGGTGTTTGTCTTGTTGTTGGATCATGTGCTCGTGGGTTTAAGGACAACTCAACAAGTGATGTCATTTACAGCAGTTCATCCTTAAAAAAGGTTGGGACCTCAGAAGTTCAACTTTTCTGGGAGGCGTTTCCAGCCGGGTCGGGGCCTGTGGATCGAACTACTTACATGTTTACATATATCGATCCTCAACCAGGGTCACCTAAACTTGAAGACCTTTTAGAAGAATACTGGGATTTGATGCCAAAATATCAGGGAGTCTCTCTTGATGACTTGAAGATATTGAGAATTATTTATGGCATCTTTCCGACTTATCGTGACAGCCCGCTGCCAGCTGCTTTTGATCGTGTTCTACAGTTTGGAGATGCAAGTGGCATTCAGTCACCCGTTTCATTTGGTGGATTTGGGAGCTTGACTAGGCACCTCGGGAGGCTGTCAACTGGGATATATGAAGCTGTAACAGGCAACTTCCTCGACTCTGATAGCTTATCACTGCTGAATCCTTACATGCCTAATTTAAGTAGTTCATGGCTATTTCAAAGAGCTATGTCTGCAAAGCAACGATCAAACATTTCTCCATATTTTATCAATGAGCTTCTTCATGTAAACTTTCAGAGTATGCAGAGATTGGGGGATCCAGTGCTAAAGCCTTTCCTTCAGGATGTTGTGCAGTTTGTACCTCTTACCCAGACCCTAGGTCTAGTTATGTTAACTAAACCTCAACTTCTTCCATCAATATTCAAACAGGTTGGCATCCCAGTGTTGCTCGACTGGTCTGGACATTTCGGCATGCTTGGCTACTACACGTTTCTCTCGACATTTGTCGATCCGATTATAAGGCCGTTCCTAAGTTCACTAACACCAAAGATGAATTTCGAGTGGAAACGACGACTCGAGGCCTGGAAGTATGGAGCTGGTTTAGATTACGAACTATGA 2142 43.84 MSAKQRSNISPYFINELLHVNFQSMQRLGDPVLKPFLQDVVQFVPLTQTLGLVMLTKPQLLPSIFEQVGIPVLLDWAGHFGMLGYYTILSTFVDPIISDRVINEEIEEIVEKGRKFGGLSVDISAMTSVHFRSHNLLPANPIGRSFLHTPTAAKNPRIQANIKTQFTSSRTQRIMEGISVSGEVGGAGGAYSYNALKRLDQIWSRICSGQEAPEAAQEVVRRLSGAFSRSDSGEKATDTFDVLVCGGTLGVFIATALSLKGLRVGIVERNVLKGREQEWNISRKELIELVEVGVLTEDDIEQATAMKFNPNRCAFEGKGEIWVEDILNLGISPEKLIEIVKKRFISLGGVIFEGCNVLSLCIYDDMTVMQLSDGNILSSQLTIDAMGNFSPVVKQIRRGRKPDGVCLVVGSCARGFKDNSTSDVIYSSSSLKKVGTSEVQLFWEAFPAGSGPVDRTTYMFTYIDPQPGSPKLEDLLEEYWDLMPKYQGVSLDDLKILRIIYGIFPTYRDSPLPAAFDRVLQFGDASGIQSPVSFGGFGSLTRHLGRLSTGIYEAVTGNFLDSDSLSLLNPYMPNLSSSWLFQRAMSAKQRSNISPYFINELLHVNFQSMQRLGDPVLKPFLQDVVQFVPLTQTLGLVMLTKPQLLPSIFKQVGIPVLLDWSGHFGMLGYYTFLSTFVDPIIRPFLSSLTPKMNFEWKRRLEAWKYGAGLDYEL 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8594592 8604780 + CmoCh19G009290.1 Cmo19g00929 404089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00929 713 Gene3D - 237 602 IPR036188 -
Cmo19g00929 713 PANTHER LYCOPENE BETA/EPSILON CYCLASE PROTEIN 1 98 - -
Cmo19g00929 713 PANTHER LYCOPENE BETA/EPSILON CYCLASE PROTEIN 1 98 - -
Cmo19g00929 713 PANTHER LYCOPENE BETA/EPSILON CYCLASE PROTEIN 157 712 - -
Cmo19g00929 713 PANTHER LYCOPENE BETA/EPSILON CYCLASE PROTEIN 157 712 - -
Cmo19g00929 713 SUPERFAMILY FAD/NAD(P)-binding domain 237 562 IPR036188 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo19g00929 Cmo20g00234 CCT
Cmo02g00084 Cmo19g00929 CCT
Cmo19g00929 Cmo20g00234 ECH
Cmo02g00084 Cmo19g00929 ECH
Cmo11g01880 Cmo19g00929 CST
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00929 - - csv:101203820 1073.15