Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00934 ATGTCTACGATGGTGGCCATGGCCTCCGGCGGAGTGCCTTCCATCCCTTCGTCAATATCCCCGCCGCCGGTCACTTTGCCGCTCAAAAACATCCCCGGCAGTCATGGCTTGCCGCTGTTCGGATCCATCGCCGACCGCCTCGATTACTTCTGGTTTCAAGGACCGGACAAGTTCTTCAGGAGTCGGATCGAGAAGAATCGGAGCACGGTTTTCAGGACGAATGTCCCTCCGTCGTTCCCCTTCTTCTTAAGCGATCCGAAAGTGATTGCGGTTCTCGATTGCAAGTCGTTTGCGCATCTGTTCGACATGGAGGTAGTGGAGAAGAAGAATGTTCTGGTCGGCGATTTCATGCCCAGCACTAGCTTCACCGGGAACATGAGAATGTGTGCCTATTTGGATCCGTCGGAATCTCAACACTCGAAGATTAAGAACTTCACCATAGACATCCTGCGGCGGAGCTCGAAGATTTGGATACCCGAGCTGGAATCCAACCTCTCCACGTTTTGGGACGGCATTGAATCCGAAATCGCAAACAACCAAAAATCCACCTACAGAAACCTTCTCCAACCAGCTCTTTTCAATTTCTTCTCCAAAACCCTGGCCGGCGCCGATACTGCAAAATCACCGGAAGTGGCGAAATCCGCCTACATCGACGTCATCATCTGGCTCGGCCTCCAGCTCGTCCCCACCATCCACCTCGGCATTTTACAGCCCCTCGAGGAAATCTTCCTCCATTCTTTCCGATTACCCTTCTTCCCCATCGCCGGCCGCTACCGGAGACTCTACGATTTCATCGAAAAGGAAGGGGAAGAAGTGGTGCAGCGAGGCGTTTCCGAGTTCGGGTTGAAGAAGGAAGAAGCCATTCACAATCTTATCTTCACCTTAGGATTCAACGCCTACGGTGGATTCAGCCTCTTTCTTCCGGTTCTAATGGACCGTATACTCAACGACAGAACCGGCTTACAACAGAGAATCGTCGACGAAGTGAGGGCAAAATCCGGGTCGGGACTGACATTTGAGTCCGTGAAGGAGATGGAGCTGGTTTACTCCCTCGTGTACGAGGCGCTCCGGCTGGACCCGCCGGTTCCGACCCAATACGCGAGAGCGAGGAAGGAGTTCAAGCTAAGTTCGCACGATGCAGTGTTCGAGATCAAGAAGGGAGAGCTGCTTTGTGGGTATCAGCCGCTGGTGATGAGGGACCCCAACGTGTTCGAGGAGCCGGAGGCGTTTAAGCCGGACCGGTTCAGGGAGGAGAAAGGGGCGGCGCTGCTGGATTATCTGTTCTGGTCAAACGGGCCGCAGACGGGGATGAGCAGCGAGCATAACAAGCAATGTGCAGCGAAGGATTTGGTGGTGCTGACGGCGGTGGTATTTGTGGCTTACATATTTCGAAGGTATGATTCAATTGCAGGGGAGGGCGGCTCGATTACAGCACTCCAAAAGCCTAATTGA 1452 53.65 MSTMVAMASGGVPSIPSSISPPPVTLPLKNIPGSHGLPLFGSIADRLDYFWFQGPDKFFRSRIEKNRSTVFRTNVPPSFPFFLSDPKVIAVLDCKSFAHLFDMEVVEKKNVLVGDFMPSTSFTGNMRMCAYLDPSESQHSKIKNFTIDILRRSSKIWIPELESNLSTFWDGIESEIANNQKSTYRNLLQPALFNFFSKTLAGADTAKSPEVAKSAYIDVIIWLGLQLVPTIHLGILQPLEEIFLHSFRLPFFPIAGRYRRLYDFIEKEGEEVVQRGVSEFGLKKEEAIHNLIFTLGFNAYGGFSLFLPVLMDRILNDRTGLQQRIVDEVRAKSGSGLTFESVKEMELVYSLVYEALRLDPPVPTQYARARKEFKLSSHDAVFEIKKGELLCGYQPLVMRDPNVFEEPEAFKPDRFREEKGAALLDYLFWSNGPQTGMSSEHNKQCAAKDLVVLTAVVFVAYIFRRYDSIAGEGGSITALQKPN 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8618602 8620963 + CmoCh19G009340.1 Cmo19g00934 404094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00934 483 PANTHER CYTOCHROME P450 26 21 472 - -
Cmo19g00934 483 PRINTS E-class P450 group IV signature 382 396 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00934 483 PRINTS E-class P450 group IV signature 345 361 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00934 483 PRINTS E-class P450 group IV signature 398 416 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00934 483 Pfam Cytochrome P450 321 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00934 483 Gene3D Cytochrome P450 26 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g00934 483 PANTHER INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED 21 472 - -
Cmo19g00934 483 SUPERFAMILY Cytochrome P450 26 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01328 Cmo-Chr11:9170165 Cmo19g00934 Cmo-Chr19:8618602 1.29E-123 dispersed
Cmo19g00934 Cmo-Chr19:8618602 Cmo09g00944 Cmo-Chr9:4959270 7.63E-10 dispersed
Cmo19g00934 Cmo-Chr19:8618602 Cmo19g00654 Cmo-Chr19:7035716 6.37E-132 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00934 K10528 - csv:101223126 807.364