Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g00956 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCGGGAGCTGGGGCTAAAGAGTACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTTAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGACAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCCACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGGTTTCTGA 342 45.03 MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8721835 8724266 - CmoCh19G009560.1 Cmo19g00956 404116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g00956 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Cmo19g00956 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Cmo19g00956 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Cmo19g00956 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Cmo19g00956 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Cmo19g00956 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Cmo19g00956 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Cmo19g00956 113 Gene3D - 1 113 - -
Cmo19g00956 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01909 Cmo19g00956 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00953 Cmo-Chr9:5015254 Cmo19g00956 Cmo-Chr19:8721835 4.66E-58 dispersed
Cmo11g01909 Cmo-Chr11:13260102 Cmo19g00956 Cmo-Chr19:8721835 1.17E-69 dispersed
Cmo19g00955 Cmo-Chr19:8717832 Cmo19g00956 Cmo-Chr19:8721835 1.58E-80 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g00956 K03113 - csv:101219651 228.409