Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g01004 ATGGGTTGGAAGAGATCCTCGAGGAATGGCGATTTGAGGATCTGCGTGCAAGTTTTGGTCGGATTCGTCATCTGTTCAGCTCATGTTCTTGTCGGAGTTACGAATCCTGGGGATGTTGCTGCTATTAGTAGCTTACATACTGCACTGGGACTCCCCAGTCTTCCTGGATGGGGCATTGGGCAAGATCCTTGCGGTGACGCATGGCAAGGTGTTGTATGTAATGATTCAAGCATCATTAAAATAATTGTTAATGCTGCTAATTTGGGAGGTGAACTGGGTGACGACTTGGGATTGTTTGCTTCGATCCAAACAATTGATTTAAGCAACAATCATATAGGGGGGAGTATTCCATCCAGTTTACCCATTACCATGCAGAACTTTTTTCTTTCAGCTAACGCGTTCACTGGAACTATTCCGAGTTCATTATCGTCTTTGATTCATCTGACAGCAATGTCGTTGAATGATAACAAATTAAGTGGACAAATACCAGATTCCCTTCAGGCCATCTCTCAATTGGTGAATTTGGACTTATCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTGCTAGCAACTTATTGGCACTGACCACCCTGAATTTGCAGAACAATCAGCTGTCGGGTACCCTCGATGTTCTGCAAGACCTTCCACTAAAAAACTTGAATATAGAGAACAACCTTTTCTCTGGACCCATACCTGAGAAGGTGCTGAGTATCCCTAATTTTAGAAAGGATGGAAATCCATTTAATTCTTCTGTTACTCCGGCGCCAACTCCTTCTATATCTCCCCCATTAAAGCCAGCATCAGCACCTCGAGTTTCAGGAGCACCGCCCGTTTCAGGTGCACCGCCAGTTTCTGGAGCTCCACCGTCCTCTAAACGAAACCCAAAGAAACAGGCTGATGGACCATCAGCACCAGAGGAATCCAGTTCTGGAAGAAGCAAGAAAAACACTAAAAGGGTTGTTTTGATAACAATTGCAGTAATTTTGTCATTCATAATTTTGGTTTTGGCATGTGTGCTGTTTATGCCGAGGTGCAGAAGGAGAAGAGTTGATAGTAGTTCCAAGCAACATCAGATAGGTGCTTATAGGGGCGAGAGAGAGAATGCTGGAAATCAGGGATCCATGCACCATACAATTGATCAGATACCAAATGTTCCAAAAGCGGCAGTTGTGAGGCCAAAGCAGGAACCTCAACCAGTGGCTCAGAAGGTCCCAAAAGCTCATGAAGAAACACAGAAAGATATGCCAAGAATCAGCGCTGTTCCAAAGAAGGATCATCATGAAGTAGATATGAACCCACTCGATGTCTATCTAAGGCCTCCCCCTCCCCCACCACCACCACCACCACCACCTCCTGTTGAAGTGGTCTCTGCCGTGCCCATTGTTCCAGCTGAAGTTCCTCCCTTGAAGCCTCCCACTAAACATAAAATTACCTCAACTTTTGCAAAATCTTTTACCATTGCATCCCTTCAGCAATATACAAACAGCTTTTCGCAAGAGAATCTTCTGGGAGAAGGAATGCTTGGGAGTGTATATAGAGCACAGCTTCCCAGTGGGAAGTTACTGGCCGTCAAGAAGCTGGATAAGAGAGCATTCAGTCAGCAAAAGGACGATGAATTTCTGGAGTTAGTGAATAATATCGATAGAATTCGGCACGCTAATGTGGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTTCGAGTATTGCAGCGGTGGAACATTGCAGGATGCCCTGCACTTAGATGAAGAGTTCAGAAAGAAACTTTCATGGAATGCTCGCATTAGAATTGCTCTTGGAGCTGCAAGAGCCTTGGAGTATCTACACGAGGTCTGTCAGCCGCCTGTAGTTCATAGGAATTTCAAGTCTGCAAATGTCCTGCTTGATGATGATCTTTCCGTGCGCGTTTCAGATTGTGGTCTGGCTCCATTGATATCGAAAGGAGCGGTTAGTCAGCTATCCGGTCAGCTTCTAACGAAATACGGTTACGGAGCACCAGAATTTGAATCAGGAGTTTATACACTTGAGAGCGACGTTTACAGCTTCGGTGTGGTTATGCTGGAACTTCTAACTGGTCGGATGTCTTATGACAGAACAAGGTCCCGAGGCGAGCAGTTTCTAGTCAGATGGGCGATTCCTCAGCTTCACGACATAGAGGCATTGACAAGCATGGTCGATCCTTCACTCAACGGTCGATACCCTGCCAAGTCGTTATCATACTTTGTCGATATCATATCAAAATGTGTTCAGTCGGAACCTGAATTCCGGCCACCAATGTCGACCGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCTCATGGCAGTGGTTCAAGTGAAGATTGA 2367 45.54 MGWKRSSRNGDLRICVQVLVGFVICSAHVLVGVTNPGDVAAISSLHTALGLPSLPGWGIGQDPCGDAWQGVVCNDSSIIKIIVNAANLGGELGDDLGLFASIQTIDLSNNHIGGSIPSSLPITMQNFFLSANAFTGTIPSSLSSLIHLTAMSLNDNKLSGQIPDSLQAISQLVNLDLSNNNLSGPLPPSASNLLALTTLNLQNNQLSGTLDVLQDLPLKNLNIENNLFSGPIPEKVLSIPNFRKDGNPFNSSVTPAPTPSISPPLKPASAPRVSGAPPVSGAPPVSGAPPSSKRNPKKQADGPSAPEESSSGRSKKNTKRVVLITIAVILSFIILVLACVLFMPRCRRRRVDSSSKQHQIGAYRGERENAGNQGSMHHTIDQIPNVPKAAVVRPKQEPQPVAQKVPKAHEETQKDMPRISAVPKKDHHEVDMNPLDVYLRPPPPPPPPPPPPPVEVVSAVPIVPAEVPPLKPPTKHKITSTFAKSFTIASLQQYTNSFSQENLLGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIFEYCSGGTLQDALHLDEEFRKKLSWNARIRIALGAARALEYLHEVCQPPVVHRNFKSANVLLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTKYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRSRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFVDIISKCVQSEPEFRPPMSTVVQDLLNMIRREPHGSGSSED 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8914284 8921568 - CmoCh19G010040.1 Cmo19g01004 404164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g01004 788 PANTHER OS01G0253100 PROTEIN 23 787 IPR045271 GO:0004714|GO:0006468
Cmo19g01004 788 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 23 787 - -
Cmo19g01004 788 Gene3D Ribonuclease Inhibitor 39 256 IPR032675 -
Cmo19g01004 788 MobiDBLite consensus disorder prediction 248 316 - -
Cmo19g01004 788 SUPERFAMILY Formin homology 2 domain (FH2 domain) 442 451 - -
Cmo19g01004 788 SUPERFAMILY L domain-like 52 241 - -
Cmo19g01004 788 Gene3D Transferase(Phosphotransferase) domain 1 577 784 - -
Cmo19g01004 788 Pfam Protein tyrosine and serine/threonine kinase 501 772 IPR001245 GO:0004672|GO:0006468
Cmo19g01004 788 SUPERFAMILY Protein kinase-like (PK-like) 473 772 IPR011009 -
Cmo19g01004 788 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g01004 788 ProSiteProfiles Leucine-rich repeat profile. 195 217 IPR001611 GO:0005515
Cmo19g01004 788 MobiDBLite consensus disorder prediction 348 416 - -
Cmo19g01004 788 Gene3D Phosphorylase Kinase; domain 1 470 575 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01937 Cmo19g01004 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01937 Cmo-Chr11:13388276 Cmo19g01004 Cmo-Chr19:8914284 0 dispersed
Cmo18g00544 Cmo-Chr18:4215426 Cmo19g01004 Cmo-Chr19:8914284 1.39E-48 dispersed
Cmo19g01004 Cmo-Chr19:8914284 Cmo01g00024 Cmo-Chr1:83641 7.86E-165 dispersed
Cmo19g01004 Cmo-Chr19:8914284 Cmo03g00498 Cmo-Chr3:5278539 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75114 PF07714 PK_Tyr_Ser-Thr 8.40E-42 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g01004 - - csv:101213734 1222.99