Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g01026 ATGGAGGAATCTCTGCTGGGAGGAGAAGGTAGCAGTAGCTCCAGCTCTCGACGTCAGATTCCGCATGTCAGGTTTAGGCGCCGCTCCGATGCCATCGCTTATGGCTCGGCGTACCAAAGAGCAGCTGCTCTTGTGGATCTGGCTGAAGATGGCATTGGTATACCCGAGAAAATTCTTGATCAGTCAAACTTTCAGAGTGCTGCAAGACTCTACTTCATTTTCATTAGATTTGATTTTCTTTGGTCCTTAAATTTCTTTGCGCTGATAATTCTAAATTTCTTTGAGAAACCTTTGTGGTGCTCCTCCAAATACGAGACACATTCTTGTAATGATAGGGAGTATTTCTTTCTTGGGCAATTGCCGTACTTAACAGCTGTTGAATCTCTTATATATGAGTCAAGTTGGAGTTGCTCATGTTATGGCTTTTCCAGGATAGATTATGTCGTTTGCACAATTATTTTGGTTGCCGATTTTGTCATTTATACCCTATATTTGTCGCCAGTGGCCTTTGATTCTCTTCCATTCAGAGTTGCACCATATATAAGGGTTGTCTTTTTCATCATGAATATCAGGCATCTCCGGGAGAGCATCATCATCCTGGCTGGAATGCTTGGCACATACTTGAATGTCTTGGCTCTAGGGCTTCTGTTTCTTCTGTTTTCCAGCTGGTTGGCATATGTTATATTTGAGGATACACAGCAGGGAAAAATACTTGCAAAACAAATTTCCGAGATGGACCGCTTGAGGAAAAGTATATTGGCCAAAGCTTTTGGTCTTATGGATACTAATAACGTTGGGTTTATCAATAAAGAGCAGTGCCTTGCACTTTTAGAAGAACTTAACAGATACAGGTCTTTGCCGAAAGTATCAAGGGATGATTATGAGTTAATATTTGATGAGCTGGATGACAGTCGTGATTTTAAGATTAATATGAATGAGTTCGCTGATCTTTGCAATGCTATAGCCTTGAAGTTCCAGAAGGAGGACATTCTTGATATAGCAAACAATGCAGGTCAGAAAGCATGGCAAGAACTCGAGTTTGTATTTGGTTGGATATATGTAGTTGAAATGGCTCTAAAAATCTACTCGTTTGGATTTTTGAACTATTGGAGAGATGGCCAAAATCAGTTTGATTTCCTTGTCACGTGGATTATAGAAATTGTAGGGATTCGCTACCTTCTGATAGCAAGAATGTTACGCTTGATAAGGCTCCTAATGCATGTCCGGCAATATCGAGCTTTTCTTGCTACCTTTTTAACTCTCATCCCTAGTTTGATGCCATATCTAGGAACCATTTTCTGTGTCCTCTGTCTTTATTGCACACTTGGTGTGCAGGTTGTAGCCTTTGTCTTGGAGGCATTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGCGAAGAACAGGATCAGGACGGAGATAGTAGAAAGGATCGTCGACGTTTTGTTGGCACTAAAACTCGGAGTCGCAAAGTTGACATTCTTCTCCATCATATGTTGAGTGCAGAATTGGATAAGGATTCCGATTAG 1530 40.85 MEESLLGGEGSSSSSSRRQIPHVRFRRRSDAIAYGSAYQRAAALVDLAEDGIGIPEKILDQSNFQSAARLYFIFIRFDFLWSLNFFALIILNFFEKPLWCSSKYETHSCNDREYFFLGQLPYLTAVESLIYESSWSCSCYGFSRIDYVVCTIILVADFVIYTLYLSPVAFDSLPFRVAPYIRVVFFIMNIRHLRESIIILAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTQQGKILAKQISEMDRLRKSILAKAFGLMDTNNVGFINKEQCLALLEELNRYRSLPKVSRDDYELIFDELDDSRDFKINMNEFADLCNAIALKFQKEDILDIANNAGQKAWQELEFVFGWIYVVEMALKIYSFGFLNYWRDGQNQFDFLVTWIIEIVGIRYLLIARMLRLIRLLMHVRQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVVAFVLEAFFAELDIESSENGEEQDQDGDSRKDRRRFVGTKTRSRKVDILLHHMLSAELDKDSD 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8991580 9005531 + CmoCh19G010260.1 Cmo19g01026 404186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g01026 509 SMART efh_1 293 321 IPR002048 GO:0005509
Cmo19g01026 509 SMART efh_1 252 280 IPR002048 GO:0005509
Cmo19g01026 509 SUPERFAMILY EF-hand 244 328 IPR011992 -
Cmo19g01026 509 Gene3D - 231 316 - -
Cmo19g01026 509 MobiDBLite consensus disorder prediction 1 21 - -
Cmo19g01026 509 ProSiteProfiles EF-hand calcium-binding domain profile. 248 283 IPR002048 GO:0005509
Cmo19g01026 509 Pfam Ion transport protein 318 447 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cmo19g01026 509 SUPERFAMILY Voltage-gated potassium channels 339 449 - -
Cmo19g01026 509 Gene3D - 317 409 IPR027359 -
Cmo19g01026 509 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 237 IPR044581 GO:0005245
Cmo19g01026 509 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 238 329 IPR044581 GO:0005245
Cmo19g01026 509 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 446 507 IPR044581 GO:0005245
Cmo19g01026 509 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 330 446 IPR044581 GO:0005245
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01957 Cmo19g01026 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01957 Cmo-Chr11:13470334 Cmo19g01026 Cmo-Chr19:8991580 3.98E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g01026 K16900 - csv:101206980 526.939