Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g01029 ATGGCAGCCTTTTGCTCTTGGCTGTTTTGCTCCAACTTGATGCCATGGGGACTTCCCTTTTTTACAAAACGAAAGAACTTTTTGACTTCTCAGTCAGGCCAGTTTCGTCCTCTTCAAAATTCTCTCCCGCTTCCGATCCAAACAGTTCTTTTGATCATGTCTTCTTCTTTTTCTTCTTCACGCAGTTTCTTCTGCGCTGTATTTTCAATTCTAATCTCCATTTCCATCTCAGTCACGGCTACAGAGTTCGTCTTCAACACCAATTTCACTTCCACTAATACTTTGCTCTTCGGCAACGCCACAATTGAGTCTTCTGTTCTTATTCTCACTAGAGATACCCCTTTCTCCATCGGCCGTGCCCTTTACCCCTTTAAGATTCCCATCTTTTCCTCCAATTCTTCATTTTCCTTTGCAACTTCTTTCATCTTTTCTGTCACCCCTCAGCCAAATCTTCTCCCCGGCCATGGATTTGCCTTTCTCTTCACACCCTCTACTGGAATCAATGGCACCAGCTCGGCTCAGCATTTGGGGCTTTTCAATTTCACCAATAATGGCAGCCCCAATAACCATGTCTTCGCTGTTGAGTTCGACACTTTCCAAAATCAAGAGTTCAATGACACCAATGATAACCATGTGGGCGTGGATTTGAATTCTCTCCAGTCCACCGTTTCCGCTGCAGCAGGGTTTTGGAGTGGACCAGATGATGGAGAATTCAAGCAGCTGGAGATCAATAATGGAGAAACTTATCAGGTTTGGATTGAATGTCTAGATTCTTTGCTTAATATTACAATGGCTGAAGTGGGAGTGAAAAAACCTAGAAAGCCATTGATTTCTCTGTCTGTTAATTTTTCTGGATTGCTTTTGGATAAGATGTATGTGGGATTTACAGCAGCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGCTTTAGTTCCACTAACTTTTCTATTGCTGATGCTTTAGTGATAACGAATTTGCCATCTTTTGCTCCTCAAAAGCTGGGCTCCATTTTCGAGTCGATATCTTTCATATTGGGGATAACTGTGGGTGGTGCTGGACTTGTAATTCTATGTAGTGTTGTTGTTGTAATTACCAAAAGAAGGGGACGAAAGAAACCAAAGGATGATGAAATTGAAGAGTGGGAGTTAGAATATTGGCCGCATCGGTTTGCTTATGAAGATGTTTATGAAGCAACTGAGGGGTTCTCAGAAGGCAATGTGATTGGGTTTGGGCGCAACGGGAAGGTCTATAAAGGGACCTTAGGGAGATCAAAAGTTGCTGTGAAGAGAATCTGTGTTGAAGGTGAGAGTGGGATGAGGGAGTTTGTGGCTGAGATTTCAAGCCTGGGAAGATTACAGCATAGAAATCTTGTGAAGCTTATAGGATGGTGTAAGAAGGAGAAAGGAAGCTTAATCTTAATGTATGATTACATGGAAAATGGAAGTCTAGACAAGAAGCTATTCGAGTGTGATGAGAATGCAATGCTGAGTTGGGGGGAAAGGATGAAGGTTTTGAGAGATGTAGCCACTGGGCTGCTATATCTGCACCAAGGTTGGGATTACAAGGTTCTACATAGAGATATAAAGCCCAACAACGTGCTACTCGACAAGGACATGAATGCAAAGTTAGGAGACTTTGGGTTGGCTCGAATGCAACCCCATGAGAAAACGGCAGACACAACTCAAGTGATGGGAACCGTTGGGTATATGGCACCAGAGGTGGTTCGAACAGGTCGAGTATCGGCACAGGCAGACGTTTTTGGGTTCGGGGTGTTGGTTTTGGAGGTGGTTTGTGGGAGGAGAGCAATAGAAGAGGGGAAGCCATGGTTGATAGATTGGGTAATGGAGAGGAATGAGGTTGGATTTGTAGTTGATGAGAGATTGAAAGTTGGTGGGAATGAGATTGATGAAATGGAGAGAATGGTTTGTTTGGGGTTATTGTGTGCGCAGCCTGAGGCTGGTTCAAGGCCAACAATGCAACAAGTTGTGAGCATTTTGTGCGAGGGAAATGGAAACGGAAATGGTTCAAATGATGGATTGTTGAACAGATTAAGATCAACAAGAACACTGTCTGAGATTTATGGAGGCAACCATTGCCAGCAGCATCCAACGTTTGAACAAATCAAAACATCTTCCTCTTCAACATCGCTCGTTGATTCGGATATTTTAAGGATTGGCCGCTAG 2193 43.41 MAAFCSWLFCSNLMPWGLPFFTKRKNFLTSQSGQFRPLQNSLPLPIQTVLLIMSSSFSSSRSFFCAVFSILISISISVTATEFVFNTNFTSTNTLLFGNATIESSVLILTRDTPFSIGRALYPFKIPIFSSNSSFSFATSFIFSVTPQPNLLPGHGFAFLFTPSTGINGTSSAQHLGLFNFTNNGSPNNHVFAVEFDTFQNQEFNDTNDNHVGVDLNSLQSTVSAAAGFWSGPDDGEFKQLEINNGETYQVWIECLDSLLNITMAEVGVKKPRKPLISLSVNFSGLLLDKMYVGFTAATGQLVQSHKILSWSFSSTNFSIADALVITNLPSFAPQKLGSIFESISFILGITVGGAGLVILCSVVVVITKRRGRKKPKDDEIEEWELEYWPHRFAYEDVYEATEGFSEGNVIGFGRNGKVYKGTLGRSKVAVKRICVEGESGMREFVAEISSLGRLQHRNLVKLIGWCKKEKGSLILMYDYMENGSLDKKLFECDENAMLSWGERMKVLRDVATGLLYLHQGWDYKVLHRDIKPNNVLLDKDMNAKLGDFGLARMQPHEKTADTTQVMGTVGYMAPEVVRTGRVSAQADVFGFGVLVLEVVCGRRAIEEGKPWLIDWVMERNEVGFVVDERLKVGGNEIDEMERMVCLGLLCAQPEAGSRPTMQQVVSILCEGNGNGNGSNDGLLNRLRSTRTLSEIYGGNHCQQHPTFEQIKTSSSSTSLVDSDILRIGR 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9010459 9014169 + CmoCh19G010290.1 Cmo19g01029 404189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g01029 730 CDD STKc_IRAK 411 671 - -
Cmo19g01029 730 SMART serkin_6 405 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g01029 730 Gene3D Transferase(Phosphotransferase) domain 1 481 680 - -
Cmo19g01029 730 PANTHER - 72 720 - -
Cmo19g01029 730 Gene3D - 79 327 - -
Cmo19g01029 730 Pfam Protein kinase domain 406 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g01029 730 Pfam Legume lectin domain 81 317 IPR001220 GO:0030246
Cmo19g01029 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Cmo19g01029 730 ProSiteProfiles Protein kinase domain profile. 405 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g01029 730 ProSitePatterns Protein kinases ATP-binding region signature. 411 432 IPR017441 GO:0005524
Cmo19g01029 730 CDD lectin_legume_LecRK_Arcelin_ConA 81 316 IPR001220 GO:0030246
Cmo19g01029 730 SUPERFAMILY Concanavalin A-like lectins/glucanases 79 320 IPR013320 -
Cmo19g01029 730 SUPERFAMILY Protein kinase-like (PK-like) 381 669 IPR011009 -
Cmo19g01029 730 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 72 720 - -
Cmo19g01029 730 Gene3D Phosphorylase Kinase; domain 1 390 480 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo19g01029 Cmo20g00222 CCT
Cmo02g00098 Cmo19g01029 CCT
Cmo02g00098 Cmo19g01029 ECH
Cmo19g01029 Cmo20g00222 ECH
Cmo11g01960 Cmo19g01029 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g01029 Cmo-Chr19:9010459 Cmo14g00123 Cmo-Chr14:542648 1.41E-155 dispersed
Cmo11g01960 Cmo-Chr11:13491556 Cmo19g01029 Cmo-Chr19:9010459 0 wgd
Cmo13g00661 Cmo-Chr13:6954194 Cmo19g01029 Cmo-Chr19:9010459 0 wgd
Cmo18g00348 Cmo-Chr18:2278900 Cmo19g01029 Cmo-Chr19:9010459 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75115 PF00069 Pkinase 1.50E-45 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g01029 - - csv:101216388 1079.7