Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g01035 ATGGCCACGGTGGATGATTCGAGTAGCGATCTGTCGATTATGATCGACGAAATGTATGAGTTCTCTGCTCCTCGCTTCTTCGATTTCGTCAATGGCGAGTCCGAGGAGGATAAGTGCCAAGCTGAACTATGGTTCGACACCGCTCTCACCTATGCACCTTCACCTTGTATGCCCAAAATCAAGACTGCTAGATCGATTAAGGTTGATAGCTTATTGTGCGATTTCAACCAAGCTGAAGAAATGCAGAAGAATTCAGAGCAATCCAGTAACAATTCGATCGATACCGTCGATCCAACCACATCTCAAACTGTAATCGTGCCTAGTGAAACTAACAAAGAGTTGAATCCTAGCGAACTCAGAGAAGAAAAGGCGTCTACCCAAAACGAAGCAACTGAAAAGGCTGAAAAATTAGATATTCCTCGTGAAGATGGAAGGTCTCCAAATGGTGGAATCGAACTAAGAGATACTGAACAAAATGATGTTTGTACTCCACTTCCAACTTTGAGTACTTGCAAGGGTGAACAACGAACTAAAGGGGCCACTTCTAAGAAGCACGAGGCAGCAAGAAAGATTGCCAGTATGGTAAAGAACCCATCGGCTCTGAAAGCCAGAAGTCAGTTGAAGTCATCCCAAATAAAAAACGTTAAACCAAATAGTGTAAAGAGGGAAGCTAACGTAAAAAATACATGTGGAACTTCGTCTTTAGCTCAAGAGAATCAGCCAATTAAGCGGCAAAAGTTGGATGGTGGTCTTTCTAGACAGATTCTCAATGTCAAACCCCATAATTTGCCCCACAAGTCAAAAGTTGGCGCCTCTAGCTTGTGTTCTTCGGTTGCTGACAAATCTAAGAAAGAAGATAGGAAGATTTATGTTCGAGAGCCTGCACCATTTGTCTCAATGGCTGAAATGATGAGGAAGTTCCAGTCAAGTACCAGAGGTTTATCACTGCCTCATGTCAACAACGCTCGTTCTAATGATGCTGGAAGTTTTACACAAATGAAGCCCAAGCTAACTTTGACTAGGCCAAAGGATCCTGAATTTGAAACGGCGCAAAGAGTTCGTTCTACCAAGGTGAAGAGTTCAGCTGAGCTAGAGGAGGAGATGATGGCCAAAATTCCAAAGTTCAAAGCTAGACCACTAAACAAAAAGATCTTGGAAGCTCCCAAATTACCTGTAGTACCGAGGACTACACCCCAGACTCCTGAATTTCAGGAATTTCACCTTGAGACAATGGCTAGAGCGAACCAACATGCAGACTCAGCTTCAGTAATCTCTACAGAATCGTCTCGTCAGAATAATCAATGGAAAGCTTATCTTACCGAACCAAAGACCCCTGTTCTGCACACATCACTAAGGGCTCGTCCACCGCGGGCGAAGAGTTTCCTTGAAATTGAGCAGGAGGCGCTGGAGAAAATTCCCAAGTTCAAAGCAAGACCATTAGATAAAAAGATATTTGGAAGTAAGGGAGAGTTGGGGGTGTTCTGTAACTTGAAAAAACATGTAACTAAACCGCAAGAATTTCATTTTGCTACAAATGAGAGAATTCCTCCGCCACCAACTGTTGTTGCTGATCTGTTCGACAAGCTCTCAATAAGTTCGGAAACTCGCAGCGAGAATCCATTGCCAAGGAACACTAAGCCCAACCCCTTTCATCTTTACACAGAGGAAAGAGGGGCAGAGAAAGAAAGAAAATTCTTCATGGGGCTTGTGCACAAGCAATTGGAAGAGGAAAGAGCCGCCATTCCAAGGGCTAAGCCATACCCTTACACCACCGATTATCCCGTGATGCCACCAAAACCAGAGCCCAAGCAGTGCACCAAACCTGAACCTTTCCAGCTGGAAAGTCTGGTGAGACATGAGGAAGAAATGGAAAGGGAAATGGAAGAAAGACGGAAATTAGAGGAAGAAGAGGCCAGAATGAGAAATTTCAAGGCCCAACCGGTTCTAAAGGAGGACCCAATTCCACTACCAGAGAAATCACGGAAACCCCTCACACAAATTCAAAAATTCAATCTTCATGTTGATAATCGGGCTGTGGATAGAGCAGAGTTTGATGAAAAGGTCAAGGAGAAAGAGATGATGTATAAGAGATACAGAGAAGAGAGCGACGCAGCAAGAATGGTGGAGGAAGAGAAAGCATTGAAACAACTGAGAAGAACATTGGTTCACCATGCTCGACCAGTGCCCAAATTCGACCATCCATTTCACCCCCAAAGGAGTGTTAAGGAAACAACAAAGGCCAAGTCGCCAAACTTGCGTGTCCTTCAGAGAAGAAAGGAGAGGCAAACTTTGATTAAAGTTGCAATGTCCAGCCCCGCAGCTCATTTAAGACCTTGTGCCTCCTGTGGTACCGTTTGGCTTCTCTCATATCAGTCATACACTTCTCCTCAGCTAGACAACACCGCATACCCCCGCCGCCTTGTTCCCGGAGCCGCCACCACCACCACAGATGATTATACCCTTTTCACCCCCACCACAGCCTCCTCCTTCATCCTCTCCTTCTCCAAACCTCTCCCACTGTTTCTGCTGAGATGGCTTTCCCCTGGCTTTCAGTCCATACGTTATAGTACAACAGGTGTACATGCTAATGGAGTCTTGGAGAATCTCTTAAAGACATCTTATCATGGTACTGGCTTGGCTGGAGTTTCACCTACTTCTCCGTTTCTTGTACAAGCTCCTTCTGAGAAAGGTGCAGCTGGGTTTGCTGTGGATTTTCTCATGGGAGGAGTATCTGCTGCTGTTTCGAAAACTGCTGCTGCTCCAATTGAGCGTGTCAAACTGCTGATACAAAATCAGGATGAGATGCTTAAAACTGGTAGGCTATCTGAGCCATACAAAGGAATTACTGACTGCTTTGCCCGAACAATTAAAGATGAAGGAGTCATTGCCCTATGGAGGGGAAACACAGCAAATGTCATCCGATACTTCCCGACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGGAATTTGGCCTCTGGTGGTGCTGCTGGTGCTTCCTCTCTTTTATTTGTTTATTCCCTTGATTATGCTAGAACTCGTTTAGCCAATGATGCTAAGGCCGCTAAAAAGGGTGGTGAGAGACAGTTTAACGGTCTTGTTGATGTTTACAAGAAAACCCTTAAATCTGATGGCATTGCTGGGCTGTACCGTGGATTTAACATCTCTTGTGTTGGAATTATCGTGTATCGTGGTCTTTACTTCGGAATGTATGATTCGTTGAAGCCCGTGGTTCTGGTTGGTGAGTTGCAGGATAGTTTCCTTGCTAGTTTCTTGCTTGGATGGTGTATCACAATAGGAGCTGGTTTGGCGTCGTACCCTATTGATACCGTCCGAAGAAGAATGATGATGACCTCAGGTGAAGCAGTCAAGTACAATAGCTCCTTGGACGCATTCAAACAGATCATTAAAAATGAGGGTACTAAATCTCTCTTCAAGGGTGCTGGGGCAAACATTTTGCGTGCTGTTGCCGGTGCTGGTGTGTTGGCTGGGTATGATAAGCTTCAGCTCCTTGTTCTTGGCAAGAAATATGGTTCTGGTGGTGGCGGTTAA 3609 44.89 MATVDDSSSDLSIMIDEMYEFSAPRFFDFVNGESEEDKCQAELWFDTALTYAPSPCMPKIKTARSIKVDSLLCDFNQAEEMQKNSEQSSNNSIDTVDPTTSQTVIVPSETNKELNPSELREEKASTQNEATEKAEKLDIPREDGRSPNGGIELRDTEQNDVCTPLPTLSTCKGEQRTKGATSKKHEAARKIASMVKNPSALKARSQLKSSQIKNVKPNSVKREANVKNTCGTSSLAQENQPIKRQKLDGGLSRQILNVKPHNLPHKSKVGASSLCSSVADKSKKEDRKIYVREPAPFVSMAEMMRKFQSSTRGLSLPHVNNARSNDAGSFTQMKPKLTLTRPKDPEFETAQRVRSTKVKSSAELEEEMMAKIPKFKARPLNKKILEAPKLPVVPRTTPQTPEFQEFHLETMARANQHADSASVISTESSRQNNQWKAYLTEPKTPVLHTSLRARPPRAKSFLEIEQEALEKIPKFKARPLDKKIFGSKGELGVFCNLKKHVTKPQEFHFATNERIPPPPTVVADLFDKLSISSETRSENPLPRNTKPNPFHLYTEERGAEKERKFFMGLVHKQLEEERAAIPRAKPYPYTTDYPVMPPKPEPKQCTKPEPFQLESLVRHEEEMEREMEERRKLEEEEARMRNFKAQPVLKEDPIPLPEKSRKPLTQIQKFNLHVDNRAVDRAEFDEKVKEKEMMYKRYREESDAARMVEEEKALKQLRRTLVHHARPVPKFDHPFHPQRSVKETTKAKSPNLRVLQRRKERQTLIKVAMSSPAAHLRPCASCGTVWLLSYQSYTSPQLDNTAYPRRLVPGAATTTTDDYTLFTPTTASSFILSFSKPLPLFLLRWLSPGFQSIRYSTTGVHANGVLENLLKTSYHGTGLAGVSPTSPFLVQAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGITDCFARTIKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGELQDSFLASFLLGWCITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGGG 1202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9038739 9048591 - CmoCh19G010350.1 Cmo19g01035 404195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g01035 1202 Coils Coil 613 646 - -
Cmo19g01035 1202 MobiDBLite consensus disorder prediction 728 747 - -
Cmo19g01035 1202 MobiDBLite consensus disorder prediction 160 176 - -
Cmo19g01035 1202 Gene3D Mitochondrial carrier domain 902 1197 IPR023395 -
Cmo19g01035 1202 PANTHER TARGETING PROTEIN FOR XKLP2 10 127 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Cmo19g01035 1202 Coils Coil 681 701 - -
Cmo19g01035 1202 SUPERFAMILY Mitochondrial carrier 900 1186 IPR023395 -
Cmo19g01035 1202 Pfam Targeting protein for Xklp2 (TPX2) domain 670 745 IPR027329 -
Cmo19g01035 1202 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1004 1096 IPR018108 -
Cmo19g01035 1202 Pfam Mitochondrial carrier protein 1105 1191 IPR018108 -
Cmo19g01035 1202 Pfam Mitochondrial carrier protein 900 996 IPR018108 -
Cmo19g01035 1202 Pfam Mitochondrial carrier protein 1003 1096 IPR018108 -
Cmo19g01035 1202 PANTHER TARGETING PROTEIN FOR XKLP2 156 741 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Cmo19g01035 1202 ProSiteProfiles Solute carrier (Solcar) repeat profile. 899 992 IPR018108 -
Cmo19g01035 1202 MobiDBLite consensus disorder prediction 82 113 - -
Cmo19g01035 1202 Pfam Cell cycle regulated microtubule associated protein 337 509 IPR027330 -
Cmo19g01035 1202 PRINTS Adenine nucleotide translocator signature 1004 1017 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo19g01035 1202 PRINTS Adenine nucleotide translocator signature 978 990 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo19g01035 1202 PRINTS Adenine nucleotide translocator signature 1109 1125 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo19g01035 1202 PRINTS Adenine nucleotide translocator signature 901 913 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo19g01035 1202 PRINTS Adenine nucleotide translocator signature 945 966 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo19g01035 1202 MobiDBLite consensus disorder prediction 114 150 - -
Cmo19g01035 1202 MobiDBLite consensus disorder prediction 82 185 - -
Cmo19g01035 1202 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1108 1190 IPR018108 -
Cmo19g01035 1202 PANTHER PROTEIN TPX2 156 741 - -
Cmo19g01035 1202 PANTHER PROTEIN TPX2 10 127 - -
Cmo19g01035 1202 MobiDBLite consensus disorder prediction 728 743 - -
Cmo19g01035 1202 PRINTS Mitochondrial carrier protein signature 904 917 IPR002067 GO:0055085
Cmo19g01035 1202 PRINTS Mitochondrial carrier protein signature 917 931 IPR002067 GO:0055085
Cmo19g01035 1202 PRINTS Mitochondrial carrier protein signature 967 987 IPR002067 GO:0055085
Cmo19g01035 1202 PRINTS Mitochondrial carrier protein signature 1069 1087 IPR002067 GO:0055085
Cmo19g01035 1202 PRINTS Mitochondrial carrier protein signature 1019 1037 IPR002067 GO:0055085
Cmo19g01035 1202 PRINTS Mitochondrial carrier protein signature 1113 1135 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02929 Cmo-Chr4:20752064 Cmo19g01035 Cmo-Chr19:9038739 5.66E-20 dispersed
Cmo05g00099 Cmo-Chr5:399849 Cmo19g01035 Cmo-Chr19:9038739 4.48E-60 dispersed
Cmo08g00523 Cmo-Chr8:3271650 Cmo19g01035 Cmo-Chr19:9038739 0 dispersed
Cmo08g00524 Cmo-Chr8:3276053 Cmo19g01035 Cmo-Chr19:9038739 4.40E-129 dispersed
Cmo12g00580 Cmo-Chr12:3589821 Cmo19g01035 Cmo-Chr19:9038739 1.79E-59 dispersed
Cmo13g01101 Cmo-Chr13:9042063 Cmo19g01035 Cmo-Chr19:9038739 2.59E-125 dispersed
Cmo15g00253 Cmo-Chr15:1234673 Cmo19g01035 Cmo-Chr19:9038739 5.32E-13 dispersed
Cmo16g01075 Cmo-Chr16:7593430 Cmo19g01035 Cmo-Chr19:9038739 1.56E-46 dispersed
Cmo18g00018 Cmo-Chr18:72583 Cmo19g01035 Cmo-Chr19:9038739 1.68E-123 dispersed
Cmo11g01996 Cmo-Chr11:13672582 Cmo19g01035 Cmo-Chr19:9038739 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g01035 K16812 - csv:101211649 1305.04